RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PLXNA2O75051 1894 aa4.21□□□□□ -1.74
RTF1-203ENST00000473214 ZFC3H1O60293 1989 aaKnown RBP4.21□□□□□ -1.74
RTF1-203ENST00000473214 POLQO75417 2590 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 NBASA2RRP1 2371 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 SRRM5B3KS81 715 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 K7ERS5 55 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 SOCS1O15524 211 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 HCRTO43612 131 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 ZNF432O94892 652 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 RPL18Q07020 188 aaKnown RBP4.2□□□□□ -1.74
RTF1-203ENST00000473214 ZNF846Q147U1 533 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 LGALS9BQ3B8N2 356 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 LGALS9CQ6DKI2 356 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 CGB2Q6NT52 195 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 TMEM91Q6ZNR0 172 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 APCDD1LQ8NCL9 501 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 SEC11CQ9BY50 192 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 NPCDR1Q9BY65 106 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 OSTCQ9NRP0 149 aa4.2□□□□□ -1.74
RTF1-203ENST00000473214 KLK5Q9Y337 293 aaPredicted RBP4.2□□□□□ -1.74
RTF1-203ENST00000473214 CHCHD2Q9Y6H1 151 aaPredicted RBP4.2□□□□□ -1.74
RTF1-203ENST00000473214 SETD2Q9BYW2 2564 aaPredicted RBP4.2□□□□□ -1.74
RTF1-203ENST00000473214 F8P00451 2351 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 SPTBN1Q01082 2364 aaKnown RBP4.19□□□□□ -1.74
RTF1-203ENST00000473214 NCKAP5O14513 1909 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 TRAV12-2A0A075B6T6 113 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 IGHV3-43A0A0B4J1X8 118 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 IGHV5-51A0A0C4DH38 117 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 IGHV5-10-1A0A0J9YXX1 117 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 A0A1W2PRS3 328 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 LEPROTO15243 131 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 IGLV3-25P01717 112 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 HSPB1P04792 205 aaKnown RBP4.19□□□□□ -1.74
RTF1-203ENST00000473214 SNRPD3P62318 126 aaKnown RBP4.19□□□□□ -1.74
RTF1-203ENST00000473214 Q56UQ5 140 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 CLLU1Q5K131 121 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 FAM104BQ5XKR9 115 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 ZNF705AQ6ZN79 300 aaPredicted RBP4.19□□□□□ -1.74
RTF1-203ENST00000473214 ATOH7Q8N100 152 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 MORN4Q8NDC4 146 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 ITLN2Q8WWU7 325 aaPredicted RBP4.19□□□□□ -1.74
RTF1-203ENST00000473214 RBMXL1Q96E39 390 aaKnown RBP4.19□□□□□ -1.74
RTF1-203ENST00000473214 AGPAT4-IT1Q9H0P7 198 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 CITO14578 2027 aa4.19□□□□□ -1.74
RTF1-203ENST00000473214 DOCK4Q8N1I0 1966 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 ZFHX3Q15911 3703 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 SCN1AP35498 2009 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 CELSR2Q9HCU4 2923 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 TRGV10A0A0A0MS01 117 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 TCRBV3S1A0A5B6 114 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 FAM72CH0Y354 149 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 RER1O15258 196 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 SYNGR2O43760 224 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 PMP2P02689 132 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 APCSP02743 223 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 CXCL8P10145 99 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 IL7P13232 177 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 HLA-DMBP28068 263 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 RNASE4P34096 147 aaKnown RBP4.18□□□□□ -1.74
RTF1-203ENST00000473214 RPL27AP46776 148 aaKnown RBP4.18□□□□□ -1.74
RTF1-203ENST00000473214 NANOS2P60321 138 aaKnown RBP4.18□□□□□ -1.74
RTF1-203ENST00000473214 AKR1C1Q04828 323 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 ZNF678Q5SXM1 525 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 FAM72AQ5TYM5 149 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 EIF5AL1Q6IS14 154 aaKnown RBP4.18□□□□□ -1.74
RTF1-203ENST00000473214 FAM72DQ6L9T8 149 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 HIST1H2BLQ99880 126 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 FGFBP2Q9BYJ0 223 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 AP4S1Q9Y587 144 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 ADGRG4Q8IZF6 3080 aa4.18□□□□□ -1.74
RTF1-203ENST00000473214 CELSR1Q9NYQ6 3014 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 IGHV3-21A0A0B4J1V1 117 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 KLF18A0A0U1RQI7 1052 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 OR51F1A6NGY5 319 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 APOC4-APOC2K7ER74 178 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 NDUFB2O95178 105 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 INSP01308 110 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 IGLV1-44P01699 117 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 HBDP02042 147 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 APOC2P02655 101 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 OR5AC1P0C628 307 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 TRGC1P0CF51 173 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 IGHV1-8P0DP01 117 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 CD28P10747 220 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 NPPCP23582 126 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 TSPEAR-AS2P59090 65 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
RTF1-203ENST00000473214 KLRD1Q13241 179 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 KIF26BQ2KJY2 2108 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 MRPL51Q4U2R6 128 aaKnown RBP4.17□□□□□ -1.74
RTF1-203ENST00000473214 TMEM155Q4W5P6 130 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 FAM74A1Q5RGS3 127 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 LINC01545Q5VT33 79 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 CRYBG3Q68DQ2 2970 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 HIST3H2BBQ8N257 126 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 ZNF525Q8N782 197 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 OR4X2Q8NGF9 303 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 CHCHD7Q9BUK0 85 aa4.17□□□□□ -1.74
RTF1-203ENST00000473214 ATG5Q9H1Y0 275 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms