RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DAZ1Q9NQZ3 744 aaKnown RBP4.81□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM14CQ9P0S9 112 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 RNF24Q9Y225 148 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 KMT2AQ03164 3969 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 HECTD4Q9Y4D8 3996 aa4.81□□□□□ -1.64
HDAC1-205ENST00000472928 A0A1W2PRE2 83 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 HSBP1L1C9JCN9 74 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 F6UZH7 168 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 LINC01619G3V211 115 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 H3BQ15 152 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 SLC17A3O00476 420 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 MRPS12O15235 138 aaKnown RBP4.8□□□□□ -1.64
HDAC1-205ENST00000472928 PDE6DO43924 150 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 APOHP02749 345 aaPredicted RBP4.8□□□□□ -1.64
HDAC1-205ENST00000472928 AMBPP02760 352 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 TRGC2P03986 189 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 IGLC2P0DOY2 106 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 HIST1H1EP10412 219 aaKnown RBP4.8□□□□□ -1.64
HDAC1-205ENST00000472928 NPPCP23582 126 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 CRYBB3P26998 211 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 GALR1P47211 349 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 SYNJ2BPP57105 145 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 RANP62826 216 aaKnown RBP4.8□□□□□ -1.64
HDAC1-205ENST00000472928 FAM106AQ4KMX7 169 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 FAM90A2PQ658T7 463 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 RPUSD4Q96CM3 377 aaKnown RBP4.8□□□□□ -1.64
HDAC1-205ENST00000472928 TVP23CQ96ET8 276 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 TXNDC17Q9BRA2 123 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 ZNF586Q9NXT0 402 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 RPH3ALQ9UNE2 315 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 ZFP30Q9Y2G7 519 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 ZNF256Q9Y2P7 627 aaPredicted RBP4.8□□□□□ -1.64
HDAC1-205ENST00000472928 UFC1Q9Y3C8 167 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 SMAD5-AS1Q9Y6J3 95 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 AGRNO00468 2067 aa4.8□□□□□ -1.64
HDAC1-205ENST00000472928 TRBV19A0A075B6N1 114 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 TGIF2-C20orf24A0A0A6YYL0 155 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 IGHV7-4-1A0A0J9YVY3 117 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM213A2RRL7 107 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 RBMY1BA6NDE4 496 aaKnown RBP4.79□□□□□ -1.64
HDAC1-205ENST00000472928 RBMY1EA6NEQ0 496 aaKnown RBP4.79□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM250H0YL14 139 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 CCL24O00175 119 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 PPBPP02775 128 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 SLC25A5P05141 298 aaKnown RBP4.79□□□□□ -1.64
HDAC1-205ENST00000472928 NBEAP1P0C6P0 100 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 RBMY1DP0C7P1 496 aaKnown RBP4.79□□□□□ -1.64
HDAC1-205ENST00000472928 FRMD6-AS1P0C7T7 363 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 EDN2P20800 178 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 BMI1P35226 326 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 GNG5P63218 68 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 PNRC1Q12796 327 aaPredicted RBP4.79□□□□□ -1.64
HDAC1-205ENST00000472928 C9orf66Q5T8R8 295 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 SIGLEC15Q6ZMC9 328 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 SMIM15Q7Z3B0 74 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 GPHB5Q86YW7 130 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 OR11H1Q8NG94 326 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 OR1N2Q8NGR9 330 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 GLMPQ8WWB7 406 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 TMEM18Q96B42 140 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 GRAMD2BQ96HH9 432 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 GPR82Q96P67 336 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 SMIM7Q9BQ49 75 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 C20orf144Q9BQM9 153 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 PYGO2Q9BRQ0 406 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 DERL1Q9BUN8 251 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 ELOVL1Q9BW60 279 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 CTDSP1Q9GZU7 261 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 PARLQ9H300 379 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 Q9H3A6 140 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 SRD5A3Q9H8P0 318 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 OTORQ9NRC9 128 aa4.79□□□□□ -1.64
HDAC1-205ENST00000472928 A0A087X0K7 114 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 A0A1W2PS18 150 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 ZNF727A8MUV8 499 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 ZNF705GA8MUZ8 300 aaPredicted RBP4.78□□□□□ -1.64
HDAC1-205ENST00000472928 PEX7O00628 323 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 BUB3O43684 328 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 NDUFB4O95168 129 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 RPS20P60866 119 aaKnown RBP4.78□□□□□ -1.64
HDAC1-205ENST00000472928 PDE6HQ13956 83 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 PDZD11Q5EBL8 140 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 C5orf17Q8NAS9 161 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 OR2D3Q8NGH3 330 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 ORAOV1Q8WV07 137 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 TM2D3Q9BRN9 247 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 NIPSNAP3BQ9BS92 247 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 AAMDCQ9H7C9 122 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 SELENOKQ9Y6D0 94 aa4.78□□□□□ -1.64
HDAC1-205ENST00000472928 ABCA13Q86UQ4 5058 aa4.77□□□□□ -1.65
HDAC1-205ENST00000472928 PGPA6NDG6 321 aa4.77□□□□□ -1.65
HDAC1-205ENST00000472928 HELTA6NFD8 242 aa4.77□□□□□ -1.65
HDAC1-205ENST00000472928 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms