RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 SLC25A4P12235 298 aa0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 RPL7P18124 248 aaKnown RBP0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 ETV6P41212 452 aa0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 GTF2A1P52655 376 aaPredicted RBP0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 LSM3P62310 102 aaKnown RBP0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 TFAMQ00059 246 aaKnown RBP0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 SAMD13Q5VXD3 122 aa0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 OR8J3Q8NGG0 315 aa0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 OR9Q1Q8NGQ5 310 aa0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 CBLN4Q9NTU7 201 aa0.59□□□□□ -2.31
PRPF40A-208ENST00000472760 ZGRF1Q86YA3 2104 aa0.59□□□□□ -2.32
PRPF40A-208ENST00000472760 A2MP01023 1474 aa0.59□□□□□ -2.32
PRPF40A-208ENST00000472760 IFITM5A6NNB3 132 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 M0QZK8 103 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 BLCAPP62952 87 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 C10orf99Q6UWK7 81 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 TOMM20LQ6UXN7 152 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 BRK1Q8WUW1 75 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 SMR3AQ99954 134 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 FAM103A1Q9BTL3 118 aaKnown RBP0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 USP54Q70EL1 1684 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 KCPQ6ZWJ8 1503 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 ZNF462Q96JM2 2506 aa0.58□□□□□ -2.32
PRPF40A-208ENST00000472760 PGRMC1O00264 195 aaKnown RBP0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 EVI2AP22794 236 aa0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 S100GP29377 79 aa0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 TMEM128Q5BJH2 165 aa0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 SMIM7Q9BQ49 75 aa0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 SELENOSQ9BQE4 189 aa0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 C19orf12Q9NSK7 152 aa0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 MRPL35Q9NZE8 188 aaKnown RBP0.57□□□□□ -2.32
PRPF40A-208ENST00000472760 NUP210Q8TEM1 1887 aaPredicted RBP0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 PBRM1Q86U86 1689 aa0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 TMEM189A5PLL7 270 aa0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 GLYATL3Q5SZD4 288 aa0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 SMIM15Q7Z3B0 74 aa0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 TMEM35BQ8NCS4 154 aa0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 OR5A2Q8NGI9 324 aa0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 MRPL36Q9P0J6 103 aaKnown RBP0.56□□□□□ -2.32
PRPF40A-208ENST00000472760 TMEM30CPA0ZSE6 113 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 CDC42EP2O14613 210 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 LY6G6CO95867 125 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 HBDP02042 147 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 SPINK13Q1W4C9 94 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 NAT14Q8WUY8 206 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 LINC00208Q96KT6 92 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 CCDC115Q96NT0 180 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 CTTNBP2Q8WZ74 1663 aa0.55□□□□□ -2.32
PRPF40A-208ENST00000472760 IGF2P01344 180 aa0.54□□□□□ -2.32
PRPF40A-208ENST00000472760 RPL22P35268 128 aaKnown RBP0.54□□□□□ -2.32
PRPF40A-208ENST00000472760 FXYD3Q14802 87 aa0.54□□□□□ -2.32
PRPF40A-208ENST00000472760 TSKUQ8WUA8 353 aa0.54□□□□□ -2.32
PRPF40A-208ENST00000472760 DDA1Q9BW61 102 aa0.54□□□□□ -2.32
PRPF40A-208ENST00000472760 COMMD3Q9UBI1 195 aa0.54□□□□□ -2.32
PRPF40A-208ENST00000472760 KIAA1549LQ6ZVL6 1849 aa0.53□□□□□ -2.32
PRPF40A-208ENST00000472760 TPST1O60507 370 aa0.53□□□□□ -2.32
PRPF40A-208ENST00000472760 IL7P13232 177 aa0.53□□□□□ -2.32
PRPF40A-208ENST00000472760 CKS2P33552 79 aa0.53□□□□□ -2.32
PRPF40A-208ENST00000472760 LOC101927531A0A1B0GV80 90 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 HIGD1CA8MV81 97 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 UQCRQO14949 82 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 IGKCP01834 107 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 ZNF56Q15929 161 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 LYPD5Q6UWN5 251 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 IDO2Q6ZQW0 420 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 OTOSQ8NHW6 89 aa0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 SKA2Q8WVK7 121 aaPredicted RBP0.52□□□□□ -2.33
PRPF40A-208ENST00000472760 FRAS1Q86XX4 4008 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 IGHV1-24A0A0C4DH33 117 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 NBDYA0A0U1RRE5 68 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 TSTD3H0UI37 97 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 FXYD1O00168 92 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 RHOHQ15669 191 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 DEFB132Q7Z7B7 95 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 C5orf56Q8N8D9 126 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 DMAC1Q96GE9 116 aa0.51□□□□□ -2.33
PRPF40A-208ENST00000472760 BCORL1Q5H9F3 1711 aa0.5□□□□□ -2.33
PRPF40A-208ENST00000472760 A0A0G2JMM0 328 aa0.5□□□□□ -2.33
PRPF40A-208ENST00000472760 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
PRPF40A-208ENST00000472760 MED23Q9ULK4 1368 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 PNMA8CA0A1B0GUJ8 204 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 KRTAP2-3P0C7H8 128 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 PCBD1P61457 104 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 RPL37P61927 97 aaKnown RBP0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 PSPHP78330 225 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 IQCJQ1A5X6 159 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 ASB16-AS1Q495Z4 193 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 KRTAP2-4Q9BYR9 128 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 KRTAP2-1Q9BYU5 128 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 ATG5Q9H1Y0 275 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 ZDBF2Q9HCK1 2354 aa0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.49□□□□□ -2.33
PRPF40A-208ENST00000472760 J3KT08 172 aa0.48□□□□□ -2.33
PRPF40A-208ENST00000472760 SLC25A5P05141 298 aaKnown RBP0.48□□□□□ -2.33
PRPF40A-208ENST00000472760 UNQ5815/PRO19632Q6UWF5 114 aa0.48□□□□□ -2.33
PRPF40A-208ENST00000472760 NDUFAF1Q9Y375 327 aa0.48□□□□□ -2.33
PRPF40A-208ENST00000472760 NAV3Q8IVL0 2385 aa0.48□□□□□ -2.33
PRPF40A-208ENST00000472760 ANK1P16157 1881 aa0.48□□□□□ -2.33
PRPF40A-208ENST00000472760 LOC285556D6RIA3 1793 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms