RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 M0R2Z0 102 aa14.25□□□□□ -0.13
UBQLN4-203ENST00000472638 HIST1H1AQ02539 215 aaPredicted RBP14.25□□□□□ -0.13
UBQLN4-203ENST00000472638 NDUFA5Q16718 116 aa14.25□□□□□ -0.13
UBQLN4-203ENST00000472638 SPINK13Q1W4C9 94 aa14.25□□□□□ -0.13
UBQLN4-203ENST00000472638 RPH3ALQ9UNE2 315 aa14.25□□□□□ -0.13
UBQLN4-203ENST00000472638 SMIM9A6NGZ8 99 aa14.24□□□□□ -0.13
UBQLN4-203ENST00000472638 K7EQM0 130 aa14.24□□□□□ -0.13
UBQLN4-203ENST00000472638 SRSF3P84103 164 aaKnown RBP14.24□□□□□ -0.13
UBQLN4-203ENST00000472638 TMEM208Q9BTX3 173 aa14.24□□□□□ -0.13
UBQLN4-203ENST00000472638 FBLL1A6NHQ2 334 aaKnown RBP14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 PRAC2D3DTV9 90 aa14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 SRP19P09132 144 aaKnown RBP14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 GOLT1AQ6ZVE7 132 aa14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 TMEM75Q8N9X5 138 aa14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 OR8A1Q8NGG7 326 aa14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 IGF2BP2-AS1Q96M15 143 aa14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 APLNQ9ULZ1 77 aa14.23□□□□□ -0.13
UBQLN4-203ENST00000472638 IGKV2-40A0A087WW87 121 aaPredicted RBP14.22□□□□□ -0.13
UBQLN4-203ENST00000472638 IGKV2D-40P01614 121 aaPredicted RBP14.22□□□□□ -0.13
UBQLN4-203ENST00000472638 AKR1C3P42330 323 aa14.22□□□□□ -0.13
UBQLN4-203ENST00000472638 LGALS9CQ6DKI2 356 aa14.22□□□□□ -0.13
UBQLN4-203ENST00000472638 OR10J6PQ8NGY7 276 aa14.22□□□□□ -0.13
UBQLN4-203ENST00000472638 TREM1Q9NP99 234 aa14.22□□□□□ -0.13
UBQLN4-203ENST00000472638 TRAV12-2A0A075B6T6 113 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 DEFB131BA0A096LNP1 70 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 TMEM189A5PLL7 270 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 C9JQL5 133 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 NPIPB6E9PJ23 425 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 AMBPP02760 352 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 S100A9P06702 114 aaKnown RBP14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 SPART-AS1P0CW21 52 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 C9orf47Q6ZRZ4 202 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 FMC1Q96HJ9 113 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 PPP1R14DQ9NXH3 145 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 KLF12Q9Y4X4 402 aa14.21□□□□□ -0.13
UBQLN4-203ENST00000472638 IGHV4-4A0A075B6R2 117 aa14.2□□□□□ -0.14
UBQLN4-203ENST00000472638 TRBV6-1A0A0K0K1D8 114 aa14.2□□□□□ -0.14
UBQLN4-203ENST00000472638 CRXO43186 299 aaPredicted RBP14.2□□□□□ -0.14
UBQLN4-203ENST00000472638 INSP01308 110 aa14.2□□□□□ -0.14
UBQLN4-203ENST00000472638 PRM2P04554 102 aa14.2□□□□□ -0.14
UBQLN4-203ENST00000472638 RRN3P1Q2M238 152 aa14.2□□□□□ -0.14
UBQLN4-203ENST00000472638 ZNF705GA8MUZ8 300 aaPredicted RBP14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 TCTAP57738 103 aa14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 UBE2G1P62253 170 aa14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 TMEM183BQ1AE95 376 aa14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 TMEM78Q5T7P6 136 aa14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 FAM222AQ5U5X8 452 aa14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 DKK2Q9UBU2 259 aa14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 EPPK1P58107 5090 aaKnown RBP14.19□□□□□ -0.14
UBQLN4-203ENST00000472638 IGLV2-11P01706 119 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 RPL35P42766 123 aaKnown RBP14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 TAS2R60P59551 318 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 FLI1Q01543 452 aaPredicted RBP14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 Q86TA4 180 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 LINC00477Q96M19 166 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 ODF3Q96PU9 254 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 VGLL1Q99990 258 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 DERL1Q9BUN8 251 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 PARLQ9H300 379 aa14.18□□□□□ -0.14
UBQLN4-203ENST00000472638 TRAV8-1A0A0A6YYK1 113 aa14.17□□□□□ -0.14
UBQLN4-203ENST00000472638 SFTA3P0C7M3 94 aa14.17□□□□□ -0.14
UBQLN4-203ENST00000472638 LINC00479Q96M42 142 aa14.17□□□□□ -0.14
UBQLN4-203ENST00000472638 AGPAT4-IT1Q9H0P7 198 aa14.17□□□□□ -0.14
UBQLN4-203ENST00000472638 PSG8Q9UQ74 426 aa14.17□□□□□ -0.14
UBQLN4-203ENST00000472638 LENEPQ9Y5L5 61 aa14.17□□□□□ -0.14
UBQLN4-203ENST00000472638 TRAV34A0A0B4J273 112 aa14.16□□□□□ -0.14
UBQLN4-203ENST00000472638 TRBV7-9A0A0J9YWB2 115 aa14.16□□□□□ -0.14
UBQLN4-203ENST00000472638 ZNF138P52744 262 aa14.16□□□□□ -0.14
UBQLN4-203ENST00000472638 CEBPGP53567 150 aa14.16□□□□□ -0.14
UBQLN4-203ENST00000472638 ERCC8Q13216 396 aa14.16□□□□□ -0.14
UBQLN4-203ENST00000472638 FAM74A3Q4VXF1 159 aa14.16□□□□□ -0.14
UBQLN4-203ENST00000472638 NIPSNAP3BQ9BS92 247 aa14.16□□□□□ -0.14
UBQLN4-203ENST00000472638 C9JCJ5 164 aa14.15□□□□□ -0.14
UBQLN4-203ENST00000472638 LTAP01374 205 aa14.15□□□□□ -0.14
UBQLN4-203ENST00000472638 HTN3P15516 51 aa14.15□□□□□ -0.14
UBQLN4-203ENST00000472638 SOHLH1Q5JUK2 328 aa14.15□□□□□ -0.14
UBQLN4-203ENST00000472638 LINC01587Q99440 93 aa14.15□□□□□ -0.14
UBQLN4-203ENST00000472638 NDFIP1Q9BT67 221 aa14.15□□□□□ -0.14
UBQLN4-203ENST00000472638 ZNF492Q9P255 531 aa14.15□□□□□ -0.14
UBQLN4-203ENST00000472638 TEX48A0A1B0GUV7 120 aa14.14□□□□□ -0.15
UBQLN4-203ENST00000472638 TMEM218A2RU14 115 aa14.14□□□□□ -0.15
UBQLN4-203ENST00000472638 Q8TAT8 98 aa14.14□□□□□ -0.15
UBQLN4-203ENST00000472638 SMIM12Q96EX1 92 aa14.14□□□□□ -0.15
UBQLN4-203ENST00000472638 FAM19A4Q96LR4 140 aa14.14□□□□□ -0.15
UBQLN4-203ENST00000472638 SMIM7Q9BQ49 75 aa14.14□□□□□ -0.15
UBQLN4-203ENST00000472638 ZFP30Q9Y2G7 519 aa14.14□□□□□ -0.15
UBQLN4-203ENST00000472638 ZNF727A8MUV8 499 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 CT45A10P0DMU9 189 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 HTN1P15515 57 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 AZU1P20160 251 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 GNG4P50150 75 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 KIR3DS1Q14943 382 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 ZNF674Q2M3X9 581 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 CENPWQ5EE01 88 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 SAPCD1Q5SSQ6 148 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 PRNTQ86SH4 94 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 SLC7A5P1Q8MH63 180 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 SGK494Q96LW2 274 aa14.13□□□□□ -0.15
UBQLN4-203ENST00000472638 TRBV20OR9-2A0A075B6H5 130 aa14.12□□□□□ -0.15
UBQLN4-203ENST00000472638 CRISP2P16562 243 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms