RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 LELP1Q5T871 98 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 LYZL1Q6UWQ5 148 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 LHFPL1Q86WI0 220 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 ZNF676Q8N7Q3 588 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 OR8B12Q8NGG6 310 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 NIPSNAP1Q9BPW8 284 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 NMNAT1Q9HAN9 279 aaPredicted RBP1.42□□□□□ -2.18
SGCE-210ENST00000472326 PARVBQ9HBI1 364 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 IDI2-AS1Q9NZ38 188 aa1.42□□□□□ -2.18
SGCE-210ENST00000472326 TRAV26-2A0A0B4J265 109 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 IGHV1-18A0A0C4DH31 117 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 PVALEFA0A1B0GWK0 134 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 H3BQV1 296 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 SULT1B1O43704 296 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 OR7C1O76099 320 aaPredicted RBP1.41□□□□□ -2.18
SGCE-210ENST00000472326 IGF2P01344 180 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 IFNA10P01566 189 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 IFNA14P01570 189 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 NFYAP23511 347 aaPredicted RBP1.41□□□□□ -2.18
SGCE-210ENST00000472326 G6PCP35575 357 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 RPL5P46777 297 aaKnown RBP1.41□□□□□ -2.18
SGCE-210ENST00000472326 RAB13P51153 203 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 CCL8P80075 99 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 CDK10Q15131 360 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 GRK1Q15835 563 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 GUK1Q16774 197 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 CCSMST1Q4G0I0 132 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 LIN52Q52LA3 116 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 SLC36A1Q7Z2H8 476 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 TBC1D19Q8N5T2 526 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 OR5J2Q8NH18 312 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 NMNAT3Q96T66 252 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 SNRNP25Q9BV90 132 aaKnown RBP1.41□□□□□ -2.18
SGCE-210ENST00000472326 WDR61Q9GZS3 305 aaKnown RBP1.41□□□□□ -2.18
SGCE-210ENST00000472326 CXorf21Q9HAI6 301 aa1.41□□□□□ -2.18
SGCE-210ENST00000472326 TRBV20OR9-2A0A075B6H5 130 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 IGHV3-64A0A075B6Q5 118 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 hADV38S2A0JD32 116 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 OR4C46A6NHA9 309 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 CCL22O00626 93 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 RBP1P09455 135 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 CSN1S1P47710 185 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 EVX1P49640 407 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 BASP1P80723 227 aaKnown RBP1.4□□□□□ -2.19
SGCE-210ENST00000472326 PRB3Q04118 309 aaPredicted RBP1.4□□□□□ -2.19
SGCE-210ENST00000472326 PLCXD2Q0VAA5 305 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 NNATQ16517 81 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 RPL22L1Q6P5R6 122 aaKnown RBP1.4□□□□□ -2.19
SGCE-210ENST00000472326 DHRS4L2Q6PKH6 230 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 SLC35E3Q7Z769 313 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 C12orf45Q8N5I9 185 aaPredicted RBP1.4□□□□□ -2.19
SGCE-210ENST00000472326 GDPD1Q8N9F7 314 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 PXT1Q8NFP0 134 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 OR52L1Q8NGH7 329 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 TOMM6Q96B49 74 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 MCEEQ96PE7 176 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 EFCAB1Q9HAE3 211 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 HHLA3Q9XRX5 114 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 FUT9Q9Y231 359 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 FAT3Q8TDW7 4589 aa1.4□□□□□ -2.19
SGCE-210ENST00000472326 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
SGCE-210ENST00000472326 H3BSH0 61 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 H3BUX3 64 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 J3QRK9 145 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 MFSD11O43934 449 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 CNIH1O95406 144 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 C1QCP02747 245 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 SMR3BP02814 79 aaPredicted RBP1.39□□□□□ -2.19
SGCE-210ENST00000472326 PRM2P04554 102 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 NEFHP12036 1026 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST1H2BOP23527 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST1H2BBP33778 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST1H2BDP58876 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST1H2BCP62807 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 RPL18Q07020 188 aaKnown RBP1.39□□□□□ -2.19
SGCE-210ENST00000472326 POU6F1Q14863 301 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 TAF1AQ15573 450 aaPredicted RBP1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST2H2BEQ16778 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 C12orf74Q32Q52 190 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.39□□□□□ -2.19
SGCE-210ENST00000472326 DCUN1D2Q6PH85 259 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 KRT222Q8N1A0 295 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 Q8N2B8 174 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 MCFD2Q8NI22 146 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST1H2BHQ93079 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 C2orf50Q96LR7 162 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 PPP1R2P1Q96PQ5 205 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST1H2BNQ99877 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 HIST1H2BMQ99879 126 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 NABP2Q9BQ15 211 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 IL36BQ9NZH7 164 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 MED11Q9P086 117 aa1.39□□□□□ -2.19
SGCE-210ENST00000472326 TNXBP22105 4242 aa1.38□□□□□ -2.19
SGCE-210ENST00000472326 TRAV7A0A075B6U4 112 aa1.38□□□□□ -2.19
SGCE-210ENST00000472326 TRAV38-1A0A0B4J264 116 aa1.38□□□□□ -2.19
SGCE-210ENST00000472326 LOC285095A0A1B0GVY8 99 aa1.38□□□□□ -2.19
SGCE-210ENST00000472326 EXOC1LA0A1B0GW35 172 aa1.38□□□□□ -2.19
SGCE-210ENST00000472326 FAM159BA6NKW6 160 aa1.38□□□□□ -2.19
SGCE-210ENST00000472326 LEPROTO15243 131 aa1.38□□□□□ -2.19
SGCE-210ENST00000472326 PDE6DO43924 150 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms