RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 TCL1AP56279 114 aa13.07□□□□□ -0.32
COMMD1-207ENST00000471704 C18orf15Q96N68 181 aa13.07□□□□□ -0.32
COMMD1-207ENST00000471704 IGHV1OR15-1A0A075B7D0 117 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 CSN1S1P47710 185 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 ZNF266Q14584 549 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 IBA57Q5T440 356 aaKnown RBP13.06□□□□□ -0.32
COMMD1-207ENST00000471704 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 OR10G4Q8NGN3 311 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 OR10G9Q8NGN4 311 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 OR10G7Q8NGN6 311 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 OR2G3Q8NGZ4 309 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 RXFP4Q8TDU9 374 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 GNPNAT1Q96EK6 184 aaPredicted RBP13.06□□□□□ -0.32
COMMD1-207ENST00000471704 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 OTORQ9NRC9 128 aa13.06□□□□□ -0.32
COMMD1-207ENST00000471704 TRGV1A0A0A0MS02 117 aa13.05□□□□□ -0.32
COMMD1-207ENST00000471704 PGPA6NDG6 321 aa13.05□□□□□ -0.32
COMMD1-207ENST00000471704 RGS13O14921 159 aa13.05□□□□□ -0.32
COMMD1-207ENST00000471704 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
COMMD1-207ENST00000471704 TNP2Q05952 138 aa13.05□□□□□ -0.32
COMMD1-207ENST00000471704 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
COMMD1-207ENST00000471704 VSIG2Q96IQ7 327 aa13.05□□□□□ -0.32
COMMD1-207ENST00000471704 A0A1W2PPV4 95 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 RNF222A6NCQ9 220 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 GIPP09681 153 aaPredicted RBP13.04□□□□□ -0.32
COMMD1-207ENST00000471704 MUC21Q5SSG8 566 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 Q6AWC8 147 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 SSX7Q7RTT5 188 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 SH3BGRL3Q9H299 93 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 RPH3ALQ9UNE2 315 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 HSPG2P98160 4391 aa13.04□□□□□ -0.32
COMMD1-207ENST00000471704 G3V3Q6 166 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 H3BNG1 76 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 STAG3L2P0CL84 134 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 STAG3L3P0CL85 134 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 ARL14EPLP0DKL9 152 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 CDC34P49427 236 aaPredicted RBP13.03□□□□□ -0.32
COMMD1-207ENST00000471704 C6orf223Q8N319 242 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 TVP23CQ96ET8 276 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 PSMG3Q9BT73 122 aaPredicted RBP13.03□□□□□ -0.32
COMMD1-207ENST00000471704 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
COMMD1-207ENST00000471704 LENEPQ9Y5L5 61 aa13.03□□□□□ -0.32
COMMD1-207ENST00000471704 LRP1BQ9NZR2 4599 aa13.02□□□□□ -0.33
COMMD1-207ENST00000471704 TRGV2A0A075B6R0 118 aa13.02□□□□□ -0.33
COMMD1-207ENST00000471704 GNG5P63218 68 aa13.02□□□□□ -0.33
COMMD1-207ENST00000471704 ESRGQ1W209 222 aa13.02□□□□□ -0.33
COMMD1-207ENST00000471704 SUN5Q8TC36 379 aa13.02□□□□□ -0.33
COMMD1-207ENST00000471704 TMED6Q8WW62 240 aa13.02□□□□□ -0.33
COMMD1-207ENST00000471704 MDFICQ9P1T7 246 aa13.02□□□□□ -0.33
COMMD1-207ENST00000471704 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
COMMD1-207ENST00000471704 GOLT1AQ6ZVE7 132 aa13.01□□□□□ -0.33
COMMD1-207ENST00000471704 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
COMMD1-207ENST00000471704 ARPC5LQ9BPX5 153 aa13.01□□□□□ -0.33
COMMD1-207ENST00000471704 TNFSF18Q9UNG2 199 aa13.01□□□□□ -0.33
COMMD1-207ENST00000471704 A0A096LPF7 62 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 ZNF415Q09FC8 603 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 RPL7L1Q6DKI1 246 aaKnown RBP13□□□□□ -0.33
COMMD1-207ENST00000471704 ARL6IP6Q8N6S5 226 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 ASB13Q8WXK3 278 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 ST6GAL2Q96JF0 529 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 KRTAP1-5Q9BYS1 174 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 Q9H8V8 135 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 ABCA13Q86UQ4 5058 aa13□□□□□ -0.33
COMMD1-207ENST00000471704 IGHV3-53P01767 116 aa12.99□□□□□ -0.33
COMMD1-207ENST00000471704 FAM74A1Q5RGS3 127 aa12.99□□□□□ -0.33
COMMD1-207ENST00000471704 CMTM2Q8TAZ6 248 aa12.99□□□□□ -0.33
COMMD1-207ENST00000471704 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
COMMD1-207ENST00000471704 FXYD6-FXYD2A0A087WZ82 144 aa12.98□□□□□ -0.33
COMMD1-207ENST00000471704 F6UZH7 168 aa12.98□□□□□ -0.33
COMMD1-207ENST00000471704 GCHFRP30047 84 aa12.98□□□□□ -0.33
COMMD1-207ENST00000471704 SERF2P84101 59 aa12.98□□□□□ -0.33
COMMD1-207ENST00000471704 SGK494Q96LW2 274 aa12.98□□□□□ -0.33
COMMD1-207ENST00000471704 UPK3BQ9BT76 320 aa12.98□□□□□ -0.33
COMMD1-207ENST00000471704 ZNF726P1Q15940 193 aa12.97□□□□□ -0.33
COMMD1-207ENST00000471704 TMEM183BQ1AE95 376 aa12.97□□□□□ -0.33
COMMD1-207ENST00000471704 TDRG1Q3Y452 100 aa12.97□□□□□ -0.33
COMMD1-207ENST00000471704 TMEM183AQ8IXX5 376 aa12.97□□□□□ -0.33
COMMD1-207ENST00000471704 OR2T35Q8NGX2 323 aa12.97□□□□□ -0.33
COMMD1-207ENST00000471704 KRTAP4-5Q9BYR2 181 aa12.97□□□□□ -0.33
COMMD1-207ENST00000471704 GGTLC3B5MD39 225 aa12.96□□□□□ -0.33
COMMD1-207ENST00000471704 FHL2Q14192 279 aa12.96□□□□□ -0.33
COMMD1-207ENST00000471704 RGS21Q2M5E4 152 aa12.96□□□□□ -0.33
COMMD1-207ENST00000471704 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
COMMD1-207ENST00000471704 C16orf90A8MZG2 172 aa12.95□□□□□ -0.34
COMMD1-207ENST00000471704 GNRH2O43555 120 aa12.95□□□□□ -0.34
COMMD1-207ENST00000471704 MBP02144 154 aa12.95□□□□□ -0.34
COMMD1-207ENST00000471704 TCRAP04437 139 aa12.95□□□□□ -0.34
COMMD1-207ENST00000471704 FAM159AQ6UWV7 190 aa12.95□□□□□ -0.34
COMMD1-207ENST00000471704 INO80EQ8NBZ0 244 aaPredicted RBP12.95□□□□□ -0.34
COMMD1-207ENST00000471704 TREM1Q9NP99 234 aa12.95□□□□□ -0.34
COMMD1-207ENST00000471704 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
COMMD1-207ENST00000471704 CDK2AP2O75956 126 aa12.94□□□□□ -0.34
COMMD1-207ENST00000471704 IGLV2-11P01706 119 aa12.94□□□□□ -0.34
COMMD1-207ENST00000471704 TYMSP04818 313 aa12.94□□□□□ -0.34
COMMD1-207ENST00000471704 SFTA3P0C7M3 94 aa12.94□□□□□ -0.34
COMMD1-207ENST00000471704 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
COMMD1-207ENST00000471704 CRYBA4P53673 196 aa12.94□□□□□ -0.34
COMMD1-207ENST00000471704 TTC32Q5I0X7 151 aa12.94□□□□□ -0.34
COMMD1-207ENST00000471704 C5orf17Q8NAS9 161 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms