RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 MRPL54Q6P161 138 aaKnown RBP19.41■□□□□ 0.7
U2AF1-208ENST00000471250 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.41■□□□□ 0.7
U2AF1-208ENST00000471250 BAHCC1Q9P281 2608 aa19.41■□□□□ 0.7
U2AF1-208ENST00000471250 RPS20P60866 119 aaKnown RBP19.4■□□□□ 0.7
U2AF1-208ENST00000471250 FABP9Q0Z7S8 132 aa19.4■□□□□ 0.7
U2AF1-208ENST00000471250 RASL11AQ6T310 242 aa19.4■□□□□ 0.7
U2AF1-208ENST00000471250 ZFAND2AQ8N6M9 145 aa19.4■□□□□ 0.7
U2AF1-208ENST00000471250 PGLYRP4Q96LB8 373 aa19.4■□□□□ 0.7
U2AF1-208ENST00000471250 GNB1LQ9BYB4 327 aa19.4■□□□□ 0.7
U2AF1-208ENST00000471250 TRAV25A0A0B4J276 109 aa19.39■□□□□ 0.69
U2AF1-208ENST00000471250 XKRY2A2RUG3 117 aa19.39■□□□□ 0.69
U2AF1-208ENST00000471250 TRGC1P0CF51 173 aa19.39■□□□□ 0.69
U2AF1-208ENST00000471250 CD300EQ496F6 205 aaPredicted RBP19.39■□□□□ 0.69
U2AF1-208ENST00000471250 WDR73Q6P4I2 378 aa19.39■□□□□ 0.69
U2AF1-208ENST00000471250 ATP5L2Q7Z4Y8 100 aa19.39■□□□□ 0.69
U2AF1-208ENST00000471250 F8P00451 2351 aa19.38■□□□□ 0.69
U2AF1-208ENST00000471250 A0A0J9YX75 114 aa19.38■□□□□ 0.69
U2AF1-208ENST00000471250 CRISP2P16562 243 aa19.38■□□□□ 0.69
U2AF1-208ENST00000471250 LINC01559Q495D7 138 aa19.38■□□□□ 0.69
U2AF1-208ENST00000471250 SAV1Q9H4B6 383 aaPredicted RBP19.38■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BKO60814 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BJP06899 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BOP23527 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BBP33778 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BDP58876 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BCP62807 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST2H2BEQ16778 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.37■□□□□ 0.69
U2AF1-208ENST00000471250 PRR9Q5T870 116 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 GDF5OSQ5U4N7 250 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 TMEM136Q6ZRR5 245 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 APRG1Q8IVJ8 170 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BHQ93079 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BNQ99877 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 HIST1H2BMQ99879 126 aa19.37■□□□□ 0.69
U2AF1-208ENST00000471250 SETXQ7Z333 2677 aaKnown RBP19.37■□□□□ 0.69
U2AF1-208ENST00000471250 SNURFLB1AK76 121 aa19.36■□□□□ 0.69
U2AF1-208ENST00000471250 Q6AWC8 147 aa19.36■□□□□ 0.69
U2AF1-208ENST00000471250 EBLN2Q6P2I7 272 aa19.36■□□□□ 0.69
U2AF1-208ENST00000471250 TMSB15BA0A087X1C1 80 aa19.36■□□□□ 0.69
U2AF1-208ENST00000471250 A0A1B0GXF2 115 aa19.36■□□□□ 0.69
U2AF1-208ENST00000471250 ORM1P02763 201 aa19.36■□□□□ 0.69
U2AF1-208ENST00000471250 SPAG8Q99932 426 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-208ENST00000471250 MT-ND6P03923 174 aa19.35■□□□□ 0.69
U2AF1-208ENST00000471250 CD33P20138 364 aa19.35■□□□□ 0.69
U2AF1-208ENST00000471250 FOXI2Q6ZQN5 318 aa19.35■□□□□ 0.69
U2AF1-208ENST00000471250 ZNF575Q86XF7 245 aa19.35■□□□□ 0.69
U2AF1-208ENST00000471250 MRPL18Q9H0U6 180 aaKnown RBP19.35■□□□□ 0.69
U2AF1-208ENST00000471250 DUSP14O95147 198 aaKnown RBP19.34■□□□□ 0.69
U2AF1-208ENST00000471250 S100A6P06703 90 aa19.34■□□□□ 0.69
U2AF1-208ENST00000471250 ODF3Q96PU9 254 aa19.34■□□□□ 0.69
U2AF1-208ENST00000471250 C11orf21Q9P2W6 132 aa19.33■□□□□ 0.69
U2AF1-208ENST00000471250 OR4C46A6NHA9 309 aa19.33■□□□□ 0.68
U2AF1-208ENST00000471250 GPX1P07203 203 aa19.33■□□□□ 0.68
U2AF1-208ENST00000471250 C2CD3Q4AC94 2353 aa19.32■□□□□ 0.68
U2AF1-208ENST00000471250 IGKV3D-20A0A0C4DH25 116 aa19.32■□□□□ 0.68
U2AF1-208ENST00000471250 HLA-DQA1P01909 254 aa19.32■□□□□ 0.68
U2AF1-208ENST00000471250 DEFB131AP59861 70 aa19.32■□□□□ 0.68
U2AF1-208ENST00000471250 ZNF256Q9Y2P7 627 aaPredicted RBP19.32■□□□□ 0.68
U2AF1-208ENST00000471250 TRAV21A0A0B4J279 112 aa19.31■□□□□ 0.68
U2AF1-208ENST00000471250 KLLNB2CW77 178 aa19.31■□□□□ 0.68
U2AF1-208ENST00000471250 J3KRW8 73 aa19.31■□□□□ 0.68
U2AF1-208ENST00000471250 RAB4BP61018 213 aa19.31■□□□□ 0.68
U2AF1-208ENST00000471250 HBBP68871 147 aa19.31■□□□□ 0.68
U2AF1-208ENST00000471250 C5orf52A6NGY3 159 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 LEPP41159 167 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 SNRPEP62304 92 aaKnown RBP19.3■□□□□ 0.68
U2AF1-208ENST00000471250 Q6ZQT7 251 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 A0A1B0GUT8 65 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 SAP30O75446 220 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 IGLC6P0CF74 106 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 NDUFA6P56556 154 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 MAP6D1Q9H9H5 199 aa19.3■□□□□ 0.68
U2AF1-208ENST00000471250 PF4P02776 101 aa19.29■□□□□ 0.68
U2AF1-208ENST00000471250 RNASE4P34096 147 aaKnown RBP19.29■□□□□ 0.68
U2AF1-208ENST00000471250 CAMPP49913 170 aa19.29■□□□□ 0.68
U2AF1-208ENST00000471250 RIGQ13278 110 aa19.29■□□□□ 0.68
U2AF1-208ENST00000471250 LYZL1Q6UWQ5 148 aa19.29■□□□□ 0.68
U2AF1-208ENST00000471250 ARMS2P0C7Q2 107 aa19.28■□□□□ 0.68
U2AF1-208ENST00000471250 KIR3DS1Q14943 382 aa19.28■□□□□ 0.68
U2AF1-208ENST00000471250 FER1L6-AS1Q8NA97 138 aa19.28■□□□□ 0.68
U2AF1-208ENST00000471250 CITED1Q99966 193 aa19.28■□□□□ 0.68
U2AF1-208ENST00000471250 TPPP3Q9BW30 176 aa19.28■□□□□ 0.68
U2AF1-208ENST00000471250 GRIFINA4D1Z8 144 aa19.27■□□□□ 0.68
U2AF1-208ENST00000471250 LINC00482Q8N8I6 264 aa19.27■□□□□ 0.68
U2AF1-208ENST00000471250 BORCS7Q96B45 105 aa19.27■□□□□ 0.68
U2AF1-208ENST00000471250 KNCNA6PVL3 124 aa19.27■□□□□ 0.67
U2AF1-208ENST00000471250 A8MTW9 85 aa19.27■□□□□ 0.67
U2AF1-208ENST00000471250 IGLV1-51P01701 117 aa19.27■□□□□ 0.67
U2AF1-208ENST00000471250 CTRLP40313 264 aa19.27■□□□□ 0.67
U2AF1-208ENST00000471250 OR2K2Q8NGT1 345 aa19.27■□□□□ 0.67
U2AF1-208ENST00000471250 SETD2Q9BYW2 2564 aaPredicted RBP19.26■□□□□ 0.67
U2AF1-208ENST00000471250 A0A1B0GW15 77 aa19.26■□□□□ 0.67
U2AF1-208ENST00000471250 IGKV3-20P01619 116 aa19.26■□□□□ 0.67
U2AF1-208ENST00000471250 APCSP02743 223 aa19.26■□□□□ 0.67
U2AF1-208ENST00000471250 HLA-DRB4P13762 266 aa19.26■□□□□ 0.67
U2AF1-208ENST00000471250 HLA-DRB4X5D2U9 266 aa19.26■□□□□ 0.67
U2AF1-208ENST00000471250 WNK1Q9H4A3 2382 aa19.25■□□□□ 0.67
U2AF1-208ENST00000471250 AMTNQ6UX39 209 aa19.25■□□□□ 0.67
U2AF1-208ENST00000471250 H3BMM0 161 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms