RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 ZNF415Q09FC8 603 aa7.72□□□□□ -1.17
RFTN1-208ENST00000470458 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
RFTN1-208ENST00000470458 DPPA3Q6W0C5 159 aa7.72□□□□□ -1.17
RFTN1-208ENST00000470458 VGLL1Q99990 258 aa7.72□□□□□ -1.17
RFTN1-208ENST00000470458 ATG101Q9BSB4 218 aa7.72□□□□□ -1.17
RFTN1-208ENST00000470458 PLAC8L1A1L4L8 177 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 TEX46H3BTG2 121 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 SEC11BP0C7V7 166 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 LGALSLQ3ZCW2 172 aaPredicted RBP7.71□□□□□ -1.18
RFTN1-208ENST00000470458 Q5BKY6 102 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 SOHLH1Q5JUK2 328 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 Q6AWC8 147 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 KCNRGQ8N5I3 272 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 ZFAND2AQ8N6M9 145 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 LINC00612Q8N6U2 182 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 HIST1H2BAQ96A08 127 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 TREM1Q9NP99 234 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 TP53TG3Q9ULZ0 132 aa7.71□□□□□ -1.18
RFTN1-208ENST00000470458 CIDEAO60543 219 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 PFDN1O60925 122 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 TCL1AP56279 114 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 CD300CQ08708 224 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 BTN1A1Q13410 526 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 TDRG1Q3Y452 100 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 TMEM88Q6PEY1 159 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 GOLT1AQ6ZVE7 132 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 IQCF2Q8IXL9 164 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 CYB561D1Q8N8Q1 229 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 EPDR1Q9UM22 224 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 BOLA1Q9Y3E2 137 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 ARL2-SNX15V9GYD0 113 aa7.7□□□□□ -1.18
RFTN1-208ENST00000470458 IFNA7P01567 189 aa7.69□□□□□ -1.18
RFTN1-208ENST00000470458 TCRAP04437 139 aa7.69□□□□□ -1.18
RFTN1-208ENST00000470458 FHITP49789 147 aa7.69□□□□□ -1.18
RFTN1-208ENST00000470458 RAB5CP51148 216 aa7.69□□□□□ -1.18
RFTN1-208ENST00000470458 SUMO1P63165 101 aaKnown RBP7.69□□□□□ -1.18
RFTN1-208ENST00000470458 TMEM75Q8N9X5 138 aa7.69□□□□□ -1.18
RFTN1-208ENST00000470458 KLF12Q9Y4X4 402 aa7.69□□□□□ -1.18
RFTN1-208ENST00000470458 STARD9Q9P2P6 4700 aa7.69□□□□□ -1.18
RFTN1-208ENST00000470458 TRGV1A0A0A0MS02 117 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 GAGE12BA1L429 117 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 HMGB3O15347 200 aaKnown RBP7.68□□□□□ -1.18
RFTN1-208ENST00000470458 SPINK4O60575 86 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 GAGE7O76087 117 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 S100A9P06702 114 aaKnown RBP7.68□□□□□ -1.18
RFTN1-208ENST00000470458 GAGE12FP0CL80 117 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 GAGE12GP0CL81 117 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 GAGE12IP0CL82 117 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 OR5I1Q13606 314 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 KIR3DS1Q14943 382 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 SMUG1Q53HV7 270 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 LINC00336Q6ZUF6 198 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 SH3BGRL3Q9H299 93 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 TMPRSS5Q9H3S3 457 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 SDF2L1Q9HCN8 221 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 GSN-AS1Q9NRJ2 163 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 RPH3ALQ9UNE2 315 aa7.68□□□□□ -1.18
RFTN1-208ENST00000470458 MAP1LC3B2A6NCE7 125 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 BCL2L11O43521 198 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 TPT1P13693 172 aaKnown RBP7.67□□□□□ -1.18
RFTN1-208ENST00000470458 FLI1Q01543 452 aaPredicted RBP7.67□□□□□ -1.18
RFTN1-208ENST00000470458 C11orf72Q8NBR9 251 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 Q8TAT8 98 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 ZNF471Q9BX82 626 aaPredicted RBP7.67□□□□□ -1.18
RFTN1-208ENST00000470458 MAP1LC3BQ9GZQ8 125 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 PLA2G2EQ9NZK7 142 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 PSG8Q9UQ74 426 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 ZFP30Q9Y2G7 519 aa7.67□□□□□ -1.18
RFTN1-208ENST00000470458 MUC4Q99102 2169 aa7.66□□□□□ -1.18
RFTN1-208ENST00000470458 NUDT3O95989 172 aa7.66□□□□□ -1.18
RFTN1-208ENST00000470458 PRM2P04554 102 aa7.66□□□□□ -1.18
RFTN1-208ENST00000470458 PFN1P07737 140 aaKnown RBP7.66□□□□□ -1.18
RFTN1-208ENST00000470458 BTF3P20290 206 aaKnown RBP7.66□□□□□ -1.18
RFTN1-208ENST00000470458 SH2D6Q7Z4S9 175 aa7.66□□□□□ -1.18
RFTN1-208ENST00000470458 RASL10AQ92737 203 aa7.66□□□□□ -1.18
RFTN1-208ENST00000470458 TXNDC17Q9BRA2 123 aa7.66□□□□□ -1.18
RFTN1-208ENST00000470458 CYTL1Q9NRR1 136 aa7.66□□□□□ -1.18
RFTN1-208ENST00000470458 TRAV26-1A0A087WT03 109 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 FABP5P3A8MUU1 101 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 G3V3Q6 166 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 M0R2P5 195 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 UBE2G1P62253 170 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 Q6ZTI0 123 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 TCTE3Q8IZS6 198 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
RFTN1-208ENST00000470458 MBD3L1Q8WWY6 194 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 FMC1Q96HJ9 113 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 PRO0255Q9UI72 69 aa7.65□□□□□ -1.18
RFTN1-208ENST00000470458 FAM74A7A6NL05 159 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 ORM1P02763 201 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 TMEM183BQ1AE95 376 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 TTC32Q5I0X7 151 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 PIK3CD-AS1Q5SR53 167 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 CST9LP1Q5W188 147 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 TMUB2Q71RG4 321 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 SSX7Q7RTT5 188 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 PRNTQ86SH4 94 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 TMEM183AQ8IXX5 376 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 SFT2D1Q8WV19 159 aa7.64□□□□□ -1.19
RFTN1-208ENST00000470458 PTH2Q96A98 100 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms