RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 Q8N8P6 123 aa7.9□□□□□ -1.14
SMC4-210ENST00000469762 AJUBAQ96IF1 538 aa7.9□□□□□ -1.14
SMC4-210ENST00000469762 AGPAT4-IT1Q9H0P7 198 aa7.9□□□□□ -1.14
SMC4-210ENST00000469762 NXT2Q9NPJ8 142 aaKnown RBP7.9□□□□□ -1.14
SMC4-210ENST00000469762 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.14
SMC4-210ENST00000469762 WNK2Q9Y3S1 2297 aa7.9□□□□□ -1.15
SMC4-210ENST00000469762 TRAV40A0A0B4J280 105 aa7.9□□□□□ -1.15
SMC4-210ENST00000469762 EBI3Q14213 229 aa7.9□□□□□ -1.15
SMC4-210ENST00000469762 MSRB2Q9Y3D2 182 aa7.9□□□□□ -1.15
SMC4-210ENST00000469762 PRTN3P24158 256 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 CEND1Q8N111 149 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 PRSS1P07477 247 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 SMIM17P0DL12 118 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 Q8N9W7 124 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 NCBP2LA6PVI3 153 aaKnown RBP7.89□□□□□ -1.15
SMC4-210ENST00000469762 E9PLD3 99 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 FABP2P12104 132 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 ZNF502Q8TBZ5 544 aa7.89□□□□□ -1.15
SMC4-210ENST00000469762 ANKHD1Q8IWZ3 2542 aaKnown RBP7.89□□□□□ -1.15
SMC4-210ENST00000469762 TLN1Q9Y490 2541 aaKnown RBP7.89□□□□□ -1.15
SMC4-210ENST00000469762 ZNF207O43670 478 aaKnown RBP7.88□□□□□ -1.15
SMC4-210ENST00000469762 CCDC140Q96MF4 163 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 LINC01548A6NM66 108 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 DPM2O94777 84 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 EFNA4P52798 201 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 KLK9Q2XQG4 91 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 PRR9Q5T870 116 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 VMO1Q7Z5L0 202 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 NHP2Q9NX24 153 aaKnown RBP7.88□□□□□ -1.15
SMC4-210ENST00000469762 KLK9Q9UKQ9 250 aa7.88□□□□□ -1.15
SMC4-210ENST00000469762 IGHV3OR16-13A0A075B7E8 117 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 IGHV3-74A0A0B4J1X5 117 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 RBAKDNA6NC62 111 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 M0R1W7 72 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 ZFP36P26651 326 aaKnown RBP7.87□□□□□ -1.15
SMC4-210ENST00000469762 TMEM160Q9NX00 188 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 CACNA1BQ00975 2339 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 HLA-DRB4P13762 266 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 RPL24P83731 157 aaKnown RBP7.87□□□□□ -1.15
SMC4-210ENST00000469762 C15orf32Q32M92 178 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 HLA-DRB4X5D2U9 266 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 ZFHX2Q9C0A1 2572 aaPredicted RBP7.87□□□□□ -1.15
SMC4-210ENST00000469762 RIF1Q5UIP0 2472 aaKnown RBP7.87□□□□□ -1.15
SMC4-210ENST00000469762 IGLL5B9A064 214 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 IGF1P05019 195 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 WFDC2Q14508 124 aa7.87□□□□□ -1.15
SMC4-210ENST00000469762 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 RNF223E7ERA6 249 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 GOSR1O95249 250 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 CLEC3BP05452 202 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 SPRY2O43597 315 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 ATP5LO75964 103 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 SRSF1Q07955 248 aaKnown RBP eCLIP7.86□□□□□ -1.159e-8■■□□□ 13.7
SMC4-210ENST00000469762 IGHV4-4A0A075B6R2 117 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 SPANXB1Q9NS25 103 aaPredicted RBP7.86□□□□□ -1.15
SMC4-210ENST00000469762 TRBV7-3A0A075B6L6 115 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 A0A087WX48 190 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 IGHV3-49A0A0A0MS15 119 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 C11orf71Q6IPW1 123 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 SMPXQ9UHP9 88 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 PRO0461Q9UI25 63 aa7.86□□□□□ -1.15
SMC4-210ENST00000469762 FOXI2Q6ZQN5 318 aa7.85□□□□□ -1.15
SMC4-210ENST00000469762 VKORC1Q9BQB6 163 aa7.85□□□□□ -1.15
SMC4-210ENST00000469762 LAGE3Q14657 143 aa7.85□□□□□ -1.15
SMC4-210ENST00000469762 C12orf74Q32Q52 190 aa7.85□□□□□ -1.15
SMC4-210ENST00000469762 SPTBN2O15020 2390 aa7.85□□□□□ -1.15
SMC4-210ENST00000469762 ATP6V0E1O15342 81 aa7.85□□□□□ -1.15
SMC4-210ENST00000469762 AKAP6Q13023 2319 aa7.85□□□□□ -1.15
SMC4-210ENST00000469762 G3V318 75 aa7.84□□□□□ -1.15
SMC4-210ENST00000469762 PSMG4Q5JS54 123 aa7.84□□□□□ -1.15
SMC4-210ENST00000469762 FAM110DQ8TAY7 271 aaPredicted RBP7.84□□□□□ -1.15
SMC4-210ENST00000469762 FAM90A27PA6NNH2 459 aa7.84□□□□□ -1.15
SMC4-210ENST00000469762 AMTNQ6UX39 209 aa7.84□□□□□ -1.15
SMC4-210ENST00000469762 C20orf173Q96LM9 149 aa7.84□□□□□ -1.15
SMC4-210ENST00000469762 U3KQE9 123 aa7.84□□□□□ -1.15
SMC4-210ENST00000469762 ATRXP46100 2492 aa7.84□□□□□ -1.15
SMC4-210ENST00000469762 H3BMG7 143 aa7.84□□□□□ -1.16
SMC4-210ENST00000469762 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.16
SMC4-210ENST00000469762 C8orf86Q6ZUL3 223 aa7.84□□□□□ -1.16
SMC4-210ENST00000469762 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.16
SMC4-210ENST00000469762 A0A1B0GWB2 263 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 SIRPDQ9H106 197 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 SPTBN1Q01082 2364 aaKnown RBP7.83□□□□□ -1.16
SMC4-210ENST00000469762 FBXL19-AS1Q494R0 122 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 CLEC19AQ6UXS0 136 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 GPHB5Q86YW7 130 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 MTURNQ8N3F0 131 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.83□□□□□ -1.16
SMC4-210ENST00000469762 INSL3P51460 131 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 ECSCRQ19T08 205 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 MORN3Q6PF18 240 aaPredicted RBP7.83□□□□□ -1.16
SMC4-210ENST00000469762 C1orf122Q6ZSJ8 110 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 RASL10AQ92737 203 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 SLC50A1Q9BRV3 221 aa7.83□□□□□ -1.16
SMC4-210ENST00000469762 A0A1W2PPR1 153 aa7.82□□□□□ -1.16
SMC4-210ENST00000469762 UFC1Q9Y3C8 167 aa7.82□□□□□ -1.16
SMC4-210ENST00000469762 CEP295Q9C0D2 2601 aa7.82□□□□□ -1.16
SMC4-210ENST00000469762 PRSS29PA6NIE9 313 aa7.82□□□□□ -1.16
SMC4-210ENST00000469762 DEFB1P60022 68 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms