RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 LENEPQ9Y5L5 61 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 A0A0D9SG52 128 aa8.2□□□□□ -1.1
MCF2L-222ENST00000469558 DAZ2Q13117 558 aaKnown RBP8.2□□□□□ -1.1
MCF2L-222ENST00000469558 Q6AWC8 147 aa8.2□□□□□ -1.1
MCF2L-222ENST00000469558 TMEM88Q6PEY1 159 aa8.2□□□□□ -1.1
MCF2L-222ENST00000469558 C5orf17Q8NAS9 161 aa8.2□□□□□ -1.1
MCF2L-222ENST00000469558 GSN-AS1Q9NRJ2 163 aa8.2□□□□□ -1.1
MCF2L-222ENST00000469558 TMEM167BQ9NRX6 74 aa8.2□□□□□ -1.1
MCF2L-222ENST00000469558 SEC11BP0C7V7 166 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 HTN3P15516 51 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 SUMO1P63165 101 aaKnown RBP8.19□□□□□ -1.1
MCF2L-222ENST00000469558 LGALSLQ3ZCW2 172 aaPredicted RBP8.19□□□□□ -1.1
MCF2L-222ENST00000469558 AKR1C8PQ5T2L2 129 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 Q6ZTI0 123 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 TMUB2Q71RG4 321 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 EIF4E3Q8N5X7 224 aaKnown RBP8.19□□□□□ -1.1
MCF2L-222ENST00000469558 CMTM2Q8TAZ6 248 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 SGK494Q96LW2 274 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 EPDR1Q9UM22 224 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 KLF12Q9Y4X4 402 aa8.19□□□□□ -1.1
MCF2L-222ENST00000469558 IGHV1OR15-1A0A075B7D0 117 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 A0A1W2PRE2 83 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 MAP1LC3B2A6NCE7 125 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 CBY3A6NI87 242 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 FAM74A7A6NL05 159 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 F6UZH7 168 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 HOXA5P20719 270 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 ZNF80P51504 273 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-222ENST00000469558 TCL1AP56279 114 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 FAM74A1Q5RGS3 127 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 IBA57Q5T440 356 aaKnown RBP8.18□□□□□ -1.1
MCF2L-222ENST00000469558 CCDC28AQ8IWP9 274 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 STOML3Q8TAV4 291 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 FAM210BQ96KR6 192 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 LINC00479Q96M42 142 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 NDUFAF3Q9BU61 184 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 ZNF471Q9BX82 626 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-222ENST00000469558 MAP1LC3BQ9GZQ8 125 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 C11orf21Q9P2W6 132 aa8.18□□□□□ -1.1
MCF2L-222ENST00000469558 DNAH2Q9P225 4427 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 A0A1B0GVG6 124 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 GAGE12BA1L429 117 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 SPINK4O60575 86 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 GAGE7O76087 117 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 C1QBP02746 253 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 UBE2G2P60604 165 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 TDRG1Q3Y452 100 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 MUC21Q5SSG8 566 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 ZNF680Q8NEM1 530 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 MDFICQ9P1T7 246 aa8.17□□□□□ -1.1
MCF2L-222ENST00000469558 SERTM2A0A1B0GWG4 89 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 KANTRA0A1W2PQU2 76 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 NACAE9PAV3 2078 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 RGS13O14921 159 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 ATP5G1P05496 136 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 ATP5G3P48201 142 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 IQCF2Q8IXL9 164 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 CYB561D1Q8N8Q1 229 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 TMEM75Q8N9X5 138 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 C18orf15Q96N68 181 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 ATG101Q9BSB4 218 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 TREM1Q9NP99 234 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 PSG8Q9UQ74 426 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
MCF2L-222ENST00000469558 TRAV34A0A0B4J273 112 aa8.15□□□□□ -1.1
MCF2L-222ENST00000469558 F5H768 121 aa8.15□□□□□ -1.1
MCF2L-222ENST00000469558 FLI1Q01543 452 aaPredicted RBP8.15□□□□□ -1.1
MCF2L-222ENST00000469558 FAM213BQ8TBF2 198 aa8.15□□□□□ -1.1
MCF2L-222ENST00000469558 MUC4Q99102 2169 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 FAT2Q9NYQ8 4349 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 UMAD1C9J7I0 102 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 PEX7O00628 323 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 TPT1P13693 172 aaKnown RBP8.14□□□□□ -1.11
MCF2L-222ENST00000469558 Q86TA4 180 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 C9orf62Q8N4C0 152 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
MCF2L-222ENST00000469558 DNAH17Q9UFH2 4485 aa8.14□□□□□ -1.11
MCF2L-222ENST00000469558 TRGV1A0A0A0MS02 117 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 IGHV3-16A0A0C4DH30 117 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 GNRH2O43555 120 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 PFDN1O60925 122 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 TYMSP04818 313 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 TMEM183BQ1AE95 376 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 DPPA3Q6W0C5 159 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 PRNTQ86SH4 94 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 AKAP14Q86UN6 197 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 ZNF575Q86XF7 245 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 TMEM183AQ8IXX5 376 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 POM121L12Q8N7R1 296 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 ARL2-SNX15V9GYD0 113 aa8.13□□□□□ -1.11
MCF2L-222ENST00000469558 A0A1B0GV50 99 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms