RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 IGHV3-66A0A0C4DH42 116 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 PCP4L1A6NKN8 68 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 TSTD3H0UI37 97 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 PPBPP02775 128 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 MED14OSP0DP75 135 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 ERCC8Q13216 396 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 SCGB2A2Q13296 93 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 FAM104BQ5XKR9 115 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 IGFL4Q6B9Z1 124 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 TEX43Q6ZNM6 134 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 Q71RC1 249 aaPredicted RBP5.77□□□□□ -1.49
COL6A3-208ENST00000468792 RNF182Q8N6D2 247 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 OR10J6PQ8NGY7 276 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 Q8TAT8 98 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 RCHY1Q96PM5 261 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 TMEM191AQ9H0A3 160 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 NAGKQ9UJ70 344 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 LAMTOR2Q9Y2Q5 125 aa5.77□□□□□ -1.49
COL6A3-208ENST00000468792 IGHV3OR16-13A0A075B7E8 117 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 IGHV3-49A0A0A0MS15 119 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 IGHV3-74A0A0B4J1X5 117 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 TRAV2A0A0B4J234 112 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 TMEM213A2RRL7 107 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 CRXO43186 299 aaPredicted RBP5.76□□□□□ -1.49
COL6A3-208ENST00000468792 SNAI2O43623 268 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 CD5LO43866 347 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 HSBP1O75506 76 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 LINC00614P0C842 121 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 AMTP48728 403 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 CACNG7P62955 275 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 TM4SF20Q53R12 229 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 NIT1Q86X76 327 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 DEFB125Q8N687 156 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 ZNF738Q8NE65 137 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 OR8A1Q8NGG7 326 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 DCANP1Q8TF63 244 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 C20orf173Q96LM9 149 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 TMEM160Q9NX00 188 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 UNC79Q9P2D8 2635 aa5.76□□□□□ -1.49
COL6A3-208ENST00000468792 TRAV21A0A0B4J279 112 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 IGKV3D-20A0A0C4DH25 116 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 SCGB1D1O95968 90 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 ORM1P02763 201 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 PF4P02776 101 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 TMEM95Q3KNT9 176 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 CDPF1Q6NVV7 123 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 ORMDL3Q8N138 153 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 ZNF664Q8N3J9 261 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 ZFAND2AQ8N6M9 145 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 WFDC11Q8NEX6 87 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 URB1-AS1Q96HZ7 61 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 MYO9AB2RTY4 2548 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 ITPR2Q14571 2701 aa5.75□□□□□ -1.49
COL6A3-208ENST00000468792 DOPEY2Q9Y3R5 2298 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 KIR2DL5BA0A0G2JN68 375 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 KIR2DL5BA0A0G2JPC4 375 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 PRSS47A8MTI9 375 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 ADARB2-AS1A8MUL3 147 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 LINC00587B1AMM8 73 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 KLLNB2CW77 178 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 NTF3P20783 257 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 CTAG1AP78358 180 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 PMCHL1Q16048 86 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 LCNL1Q6ZST4 164 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 KIR2DL5AQ8N109 375 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 Q8N976 141 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 C4orf3Q8WVX3 66 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 C20orf144Q9BQM9 153 aa5.74□□□□□ -1.49
COL6A3-208ENST00000468792 FLNAP21333 2647 aaKnown RBP5.73□□□□□ -1.49
COL6A3-208ENST00000468792 TMSB15BA0A087X1C1 80 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 C20orf202A1L168 122 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 FAM181BA6NEQ2 426 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 C2orf70A6NJV1 201 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 K7EQG2 157 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 M0QZ24 198 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 M0R2Z0 102 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
COL6A3-208ENST00000468792 C3orf79P0CE67 100 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 DDTP30046 118 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 HOXD3P31249 432 aaPredicted RBP5.73□□□□□ -1.49
COL6A3-208ENST00000468792 SNRPD3P62318 126 aaKnown RBP5.73□□□□□ -1.49
COL6A3-208ENST00000468792 KRTAP1-1Q07627 177 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 TWIST1Q15672 202 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 MRPL51Q4U2R6 128 aaKnown RBP5.73□□□□□ -1.49
COL6A3-208ENST00000468792 C10orf99Q6UWK7 81 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 SPATA12Q7Z6I5 190 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 KLHDC1Q8N7A1 406 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 MS4A6AQ9H2W1 248 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 C16orf95Q9H693 158 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 SCRT2Q9NQ03 307 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 AP5S1Q9NUS5 200 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 C11orf21Q9P2W6 132 aa5.73□□□□□ -1.49
COL6A3-208ENST00000468792 IGHV4OR15-8A0A075B7B6 117 aa5.72□□□□□ -1.49
COL6A3-208ENST00000468792 A0A087WW49 117 aa5.72□□□□□ -1.49
COL6A3-208ENST00000468792 A8MTW9 85 aa5.72□□□□□ -1.49
COL6A3-208ENST00000468792 LINC01619G3V211 115 aa5.72□□□□□ -1.49
COL6A3-208ENST00000468792 DUSP14O95147 198 aaKnown RBP5.72□□□□□ -1.49
COL6A3-208ENST00000468792 BTF3P20290 206 aaKnown RBP5.72□□□□□ -1.49
COL6A3-208ENST00000468792 RPL11P62913 178 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms