RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TAGLN2P37802 199 aaKnown RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 AKR1C3P42330 323 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 MEOX2P50222 304 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 RIPPLY3P57055 190 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 DEFB131AP59861 70 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 CD81P60033 236 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 SNRPD3P62318 126 aaKnown RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 MEF2BQ02080 365 aaPredicted RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 GOLT1AQ6ZVE7 132 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 PRNTQ86SH4 94 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 APRG1Q8IVJ8 170 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 CYB561D1Q8N8Q1 229 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 SUN5Q8TC36 379 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 SLC50A1Q9BRV3 221 aa3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 MCRIP2Q9BUT9 160 aaKnown RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 ZNF331Q9NQX6 463 aaPredicted RBP3.03□□□□□ -1.92
TMEM39A-204ENST00000468545 TRAV8-1A0A0A6YYK1 113 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 TRAV25A0A0B4J276 109 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM218A2RU14 115 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 ZNF727A8MUV8 499 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 K7EQM0 130 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 ISLRO14498 428 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 SOCS3O14543 225 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 PDE6DO43924 150 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 ZNF253O75346 499 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 IGLV1-51P01701 117 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 TCRAP04437 139 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 CD7P09564 240 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 MGST1P10620 155 aaKnown RBP3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 CAMPP49913 170 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 CNN1P51911 297 aaKnown RBP3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 FXYD7P58549 80 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 UBE2G1P62253 170 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 HIST1H1AQ02539 215 aaPredicted RBP3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 PDE6HQ13956 83 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 SOHLH1Q5JUK2 328 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 ACTL10Q5JWF8 245 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 EBLN2Q6P2I7 272 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 UQCC3Q6UW78 93 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 LYPD1Q8N2G4 141 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 C5orf17Q8NAS9 161 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 NHLRC2Q8NBF2 726 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 WFDC9Q8NEX5 89 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 OR4B1Q8NGF8 309 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 OR10J6PQ8NGY7 276 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 DCANP1Q8TF63 244 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 SPAG8Q99932 426 aaPredicted RBP3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 VGLL1Q99990 258 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 TXNDC17Q9BRA2 123 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 DERL1Q9BUN8 251 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 NKX6-2Q9C056 277 aaPredicted RBP3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 AGPAT4-IT1Q9H0P7 198 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 SLC35B3Q9H1N7 401 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 SIGLEC8Q9NYZ4 499 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 PSG8Q9UQ74 426 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 PRELID1Q9Y255 219 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 WNK1Q9H4A3 2382 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 CMYA5Q8N3K9 4069 aa3.02□□□□□ -1.93
TMEM39A-204ENST00000468545 OR11H12B2RN74 326 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 G3V4G9 280 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 M0R036 132 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 APOC3P02656 99 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 RPL35AP18077 110 aaKnown RBP3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 RPL35P42766 123 aaKnown RBP3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 INSL3P51460 131 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 CMC4P56277 68 aaPredicted RBP3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 FLI1Q01543 452 aaPredicted RBP3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 ADIRFQ15847 76 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM241Q24JQ0 296 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM78Q5T7P6 136 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 GDF5OSQ5U4N7 250 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 SAMD13Q5VXD3 122 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 PRR27Q6MZM9 219 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 BAGE2Q86Y30 109 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 STHQ8IWL8 128 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 DEFB125Q8N687 156 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 OR8A1Q8NGG7 326 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 OR2K2Q8NGT1 345 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 Q8TAT8 98 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 HIST1H2BAQ96A08 127 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 SMIM7Q9BQ49 75 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 ATG101Q9BSB4 218 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 C1QTNF4Q9BXJ3 329 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 WFDC10AQ9H1F0 79 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 PARLQ9H300 379 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 SMDT1Q9H4I9 107 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 CLEC5AQ9NY25 188 aa3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 ZNF256Q9Y2P7 627 aaPredicted RBP3.01□□□□□ -1.93
TMEM39A-204ENST00000468545 FBN1P35555 2871 aaKnown RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 TRAV2A0A0B4J234 112 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 A0A0J9YX75 114 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM250H0YL14 139 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 ATP6V1G1O75348 118 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 DUSP14O95147 198 aaKnown RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 PRB2P02812 416 aaPredicted RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 S100A9P06702 114 aaKnown RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 CT45A10P0DMU9 189 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 RNASE4P34096 147 aaKnown RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 GNG4P50150 75 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms