RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NAT8BQ9UHF3 227 aa15.38■□□□□ 0.05
TMEM53-207ENST00000468117 IZUMO1RA6ND01 250 aa15.37■□□□□ 0.05
TMEM53-207ENST00000468117 J3KRW8 73 aa15.37■□□□□ 0.05
TMEM53-207ENST00000468117 SIGLEC8Q9NYZ4 499 aa15.37■□□□□ 0.05
TMEM53-207ENST00000468117 LENEPQ9Y5L5 61 aa15.37■□□□□ 0.05
TMEM53-207ENST00000468117 TMSB15BA0A087X1C1 80 aa15.36■□□□□ 0.05
TMEM53-207ENST00000468117 FABP5P3A8MUU1 101 aa15.36■□□□□ 0.05
TMEM53-207ENST00000468117 PRR9Q5T870 116 aa15.36■□□□□ 0.05
TMEM53-207ENST00000468117 MRPL54Q6P161 138 aaKnown RBP15.36■□□□□ 0.05
TMEM53-207ENST00000468117 RAB5BP61020 215 aa15.36■□□□□ 0.05
TMEM53-207ENST00000468117 TRAV2A0A0B4J234 112 aa15.35■□□□□ 0.05
TMEM53-207ENST00000468117 A0A0J9YX75 114 aa15.35■□□□□ 0.05
TMEM53-207ENST00000468117 SAP30O75446 220 aa15.35■□□□□ 0.05
TMEM53-207ENST00000468117 Q6ZQT7 251 aa15.35■□□□□ 0.05
TMEM53-207ENST00000468117 ZFAND2AQ8N6M9 145 aa15.35■□□□□ 0.05
TMEM53-207ENST00000468117 GFRA4Q9GZZ7 299 aa15.35■□□□□ 0.05
TMEM53-207ENST00000468117 TMEM189A5PLL7 270 aa15.34■□□□□ 0.05
TMEM53-207ENST00000468117 PF4P02776 101 aa15.34■□□□□ 0.05
TMEM53-207ENST00000468117 FAM19A4Q96LR4 140 aa15.34■□□□□ 0.05
TMEM53-207ENST00000468117 ORM1P02763 201 aa15.34■□□□□ 0.05
TMEM53-207ENST00000468117 PGLYRP4Q96LB8 373 aa15.34■□□□□ 0.05
TMEM53-207ENST00000468117 SPAG8Q99932 426 aaPredicted RBP15.34■□□□□ 0.05
TMEM53-207ENST00000468117 DEFB131AP59861 70 aa15.33■□□□□ 0.04
TMEM53-207ENST00000468117 KIR3DS1Q14943 382 aa15.33■□□□□ 0.04
TMEM53-207ENST00000468117 EBLN2Q6P2I7 272 aa15.33■□□□□ 0.04
TMEM53-207ENST00000468117 ZNF256Q9Y2P7 627 aaPredicted RBP15.33■□□□□ 0.04
TMEM53-207ENST00000468117 FAM231BA6NCW3 169 aa15.33■□□□□ 0.04
TMEM53-207ENST00000468117 IGKV3-20P01619 116 aa15.33■□□□□ 0.04
TMEM53-207ENST00000468117 CITED1Q99966 193 aa15.33■□□□□ 0.04
TMEM53-207ENST00000468117 SAV1Q9H4B6 383 aaPredicted RBP15.33■□□□□ 0.04
TMEM53-207ENST00000468117 TRAV25A0A0B4J276 109 aa15.32■□□□□ 0.04
TMEM53-207ENST00000468117 OR4C46A6NHA9 309 aa15.32■□□□□ 0.04
TMEM53-207ENST00000468117 PHOX2AO14813 284 aa15.32■□□□□ 0.04
TMEM53-207ENST00000468117 GPX1P07203 203 aa15.32■□□□□ 0.04
TMEM53-207ENST00000468117 FRZBQ92765 325 aa15.32■□□□□ 0.04
TMEM53-207ENST00000468117 C11orf21Q9P2W6 132 aa15.32■□□□□ 0.04
TMEM53-207ENST00000468117 FABP9Q0Z7S8 132 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 ZNF124Q15973 351 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 ACTL10Q5JWF8 245 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 FOXI2Q6ZQN5 318 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 ZNF575Q86XF7 245 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 TRAPPC1Q9Y5R8 145 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 FBN1P35555 2871 aaKnown RBP15.31■□□□□ 0.04
TMEM53-207ENST00000468117 CRISP2P16562 243 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 LINC00482Q8N8I6 264 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 MAP6D1Q9H9H5 199 aa15.31■□□□□ 0.04
TMEM53-207ENST00000468117 TRBV7-9A0A0J9YWB2 115 aa15.3■□□□□ 0.04
TMEM53-207ENST00000468117 RNASE4P34096 147 aaKnown RBP15.3■□□□□ 0.04
TMEM53-207ENST00000468117 FOXA3P55318 350 aaPredicted RBP15.3■□□□□ 0.04
TMEM53-207ENST00000468117 TPPP3Q9BW30 176 aa15.3■□□□□ 0.04
TMEM53-207ENST00000468117 IGKV3D-20A0A0C4DH25 116 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 XKRY2A2RUG3 117 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 KNCNA6PVL3 124 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 SNURFLB1AK76 121 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 KRTAP24-1Q3LI83 254 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 LINC01559Q495D7 138 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 NOTCH3Q9UM47 2321 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BKO60814 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BJP06899 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 TRGC1P0CF51 173 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BOP23527 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BBP33778 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BDP58876 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 RAB4BP61018 213 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BCP62807 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST2H2BEQ16778 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.29■□□□□ 0.04
TMEM53-207ENST00000468117 APRG1Q8IVJ8 170 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BHQ93079 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BNQ99877 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 HIST1H2BMQ99879 126 aa15.29■□□□□ 0.04
TMEM53-207ENST00000468117 GRIFINA4D1Z8 144 aa15.28■□□□□ 0.04
TMEM53-207ENST00000468117 IGLV1-51P01701 117 aa15.28■□□□□ 0.04
TMEM53-207ENST00000468117 KLLNB2CW77 178 aa15.27■□□□□ 0.04
TMEM53-207ENST00000468117 CAMPP49913 170 aa15.27■□□□□ 0.04
TMEM53-207ENST00000468117 RPS20P60866 119 aaKnown RBP15.27■□□□□ 0.04
TMEM53-207ENST00000468117 TMEM136Q6ZRR5 245 aa15.27■□□□□ 0.04
TMEM53-207ENST00000468117 GNB1LQ9BYB4 327 aa15.27■□□□□ 0.04
TMEM53-207ENST00000468117 TRRAPQ9Y4A5 3859 aa15.27■□□□□ 0.04
TMEM53-207ENST00000468117 DUSP14O95147 198 aaKnown RBP15.27■□□□□ 0.03
TMEM53-207ENST00000468117 ATP5L2Q7Z4Y8 100 aa15.27■□□□□ 0.03
TMEM53-207ENST00000468117 MRPL18Q9H0U6 180 aaKnown RBP15.27■□□□□ 0.03
TMEM53-207ENST00000468117 TRAV21A0A0B4J279 112 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 A0A1B0GXF2 115 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 M0R2Z0 102 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 ARMS2P0C7Q2 107 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 ODF3L2Q3SX64 289 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 WDR73Q6P4I2 378 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 ODF3Q96PU9 254 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 NAGKQ9UJ70 344 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 Q6AWC8 147 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 RASL11AQ6T310 242 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 LYZL1Q6UWQ5 148 aa15.26■□□□□ 0.03
TMEM53-207ENST00000468117 HLA-DRB4P13762 266 aa15.25■□□□□ 0.03
TMEM53-207ENST00000468117 SPINK13Q1W4C9 94 aa15.25■□□□□ 0.03
TMEM53-207ENST00000468117 SPATA3Q8NHX4 192 aa15.25■□□□□ 0.03
TMEM53-207ENST00000468117 HLA-DRB4X5D2U9 266 aa15.25■□□□□ 0.03
TMEM53-207ENST00000468117 TRAV12-2A0A075B6T6 113 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 A0A1B0GUT8 65 aa15.24■□□□□ 0.03
TMEM53-207ENST00000468117 H3BMM0 161 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms