RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 DEFB135Q30KP9 77 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 ACTL10Q5JWF8 245 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 GDF5OSQ5U4N7 250 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 SPATA31B1PQ5VZV4 182 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 LINC00305Q7Z4B0 112 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 RNF182Q8N6D2 247 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 FAM218AQ96MZ4 157 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 ATP5SQ99766 215 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 RSG1Q9BU20 258 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 NPCDR1Q9BY65 106 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 WDR61Q9GZS3 305 aaKnown RBP3.63□□□□□ -1.83
U2AF1-207ENST00000468039 WFDC1Q9HC57 220 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 HSPB11Q9Y547 144 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 TENM3Q9P273 2699 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 NBEAL2Q6ZNJ1 2754 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 FXYD6-FXYD2A0A087WZ82 144 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 TRAV8-2A0A0B4J237 113 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 G3V3Q6 166 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 MRPS12O15235 138 aaKnown RBP3.62□□□□□ -1.83
U2AF1-207ENST00000468039 STAG3L2P0CL84 134 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 RPL7P18124 248 aaKnown RBP3.62□□□□□ -1.83
U2AF1-207ENST00000468039 GALR1P47211 349 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 RPL29P47914 159 aaKnown RBP3.62□□□□□ -1.83
U2AF1-207ENST00000468039 APOC4P55056 127 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 CMC4P56277 68 aaPredicted RBP3.62□□□□□ -1.83
U2AF1-207ENST00000468039 FXYD7P58549 80 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 RAB31Q13636 194 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 C1orf194Q5T5A4 169 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 C10orf113Q5VZT2 155 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 OR2T35Q8NGX2 323 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 LITAFQ99732 161 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 NIPSNAP3BQ9BS92 247 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 SLC39A9Q9NUM3 307 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 CLEC5AQ9NY25 188 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 VPS13DQ5THJ4 4388 aa3.62□□□□□ -1.83
U2AF1-207ENST00000468039 A0A1W2PPV4 95 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 H3BQ15 152 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 SLC17A3O00476 420 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 GIG44P09565 113 aaPredicted RBP3.61□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF705DP0CH99 300 aaPredicted RBP3.61□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF705BP0CI00 300 aaPredicted RBP3.61□□□□□ -1.83
U2AF1-207ENST00000468039 PYYP10082 97 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 RPL13AP40429 203 aaKnown RBP3.61□□□□□ -1.83
U2AF1-207ENST00000468039 ID1P41134 155 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 PSMB3P49720 205 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
U2AF1-207ENST00000468039 FFAR4Q5NUL3 377 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 FAM78BQ5VT40 261 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 MIR17HGQ75NE6 70 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 LINC01561Q8N1V8 128 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF709Q8N972 641 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 OR4B1Q8NGF8 309 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 SCGB1C1Q8TD33 95 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 GPR82Q96P67 336 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 AQP10Q96PS8 301 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 PFDN5Q99471 154 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 SLC25A2Q9BXI2 301 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 EDA2RQ9HAV5 297 aa3.61□□□□□ -1.83
U2AF1-207ENST00000468039 KIR2DL5BA0A0G2JN68 375 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 KIR2DL5BA0A0G2JPC4 375 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 A0A0J9YX75 114 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF705FA8MVS1 300 aaPredicted RBP3.6□□□□□ -1.83
U2AF1-207ENST00000468039 C17orf112F2Z3M2 114 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 H3BMM0 161 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 ISLRO14498 428 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 ARPC5O15511 151 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 MPDU1O75352 247 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 IFNA5P01569 189 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 OR10J4P0C629 311 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 IGLC2P0DOY2 106 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 HLA-DRB4P13762 266 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 S100A7P31151 101 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 MEOX2P50222 304 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 RAB2AP61019 212 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 ZFAND6Q6FIF0 208 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 FOXI2Q6ZQN5 318 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 BPIFA4PQ86YQ2 179 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 KIR2DL5AQ8N109 375 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 C15orf54Q8N8G6 183 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 HSD17B11Q8NBQ5 300 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF738Q8NE65 137 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 KIR2DL5BQ8NHK3 375 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 LRRC20Q8TCA0 184 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 BLNKQ8WV28 456 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 FAM167A-AS1Q96KT0 104 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 SLC35B3Q9H1N7 401 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 SH3BGRL3Q9H299 93 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 SAV1Q9H4B6 383 aaPredicted RBP3.6□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF586Q9NXT0 402 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 XCL2Q9UBD3 114 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 TNFSF18Q9UNG2 199 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 HLA-DRB4X5D2U9 266 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 STAB2Q8WWQ8 2551 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 DNAH6Q9C0G6 4158 aa3.6□□□□□ -1.83
U2AF1-207ENST00000468039 AGRNO00468 2067 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 A0A0J9YWU9 116 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 TEX46H3BTG2 121 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 M0R3E3 92 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 DEFB4AO15263 64 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms