RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 C9JCJ5 164 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 CA1P00915 261 aaPredicted RBP8.12□□□□□ -1.11
VCP-204ENST00000466100 TSPOP30536 169 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 NUTF2P61970 127 aaKnown RBP8.12□□□□□ -1.11
VCP-204ENST00000466100 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 TMEM183AQ8IXX5 376 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 MRAPQ8TCY5 172 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 ZC2HC1AQ96GY0 325 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 TREM1Q9NP99 234 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 XCL2Q9UBD3 114 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 ZFP30Q9Y2G7 519 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
VCP-204ENST00000466100 C7orf71A4D174 169 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 PGPEP1LA6NFU8 196 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 UBE2CO00762 179 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 ZNF324O75467 553 aaPredicted RBP8.11□□□□□ -1.11
VCP-204ENST00000466100 GNG4P50150 75 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
VCP-204ENST00000466100 Q6AWC8 147 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 Q6ZQT7 251 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 BAGE2Q86Y30 109 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 SMIM12Q96EX1 92 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 SMIM7Q9BQ49 75 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 NDFIP1Q9BT67 221 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 C1QTNF4Q9BXJ3 329 aa8.11□□□□□ -1.11
VCP-204ENST00000466100 J3KRW8 73 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 INSP01308 110 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 GPX1P07203 203 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 SFTA3P0C7M3 94 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 CRIP1P50238 77 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 CEBPGP53567 150 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 ZNF674Q2M3X9 581 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 SMUG1Q53HV7 270 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 DEFB121Q5J5C9 76 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 Q6ZWC4 215 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 C1orf158Q8N1D5 194 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 NHLRC2Q8NBF2 726 aa8.1□□□□□ -1.11
VCP-204ENST00000466100 TRAV12-3A0A0B4J271 114 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 ZNF727A8MUV8 499 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 K7EN84 100 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 GCGP01275 180 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 ADCYAP1P18509 176 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 RNASE4P34096 147 aaKnown RBP8.09□□□□□ -1.11
VCP-204ENST00000466100 DEFB135Q30KP9 77 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 FAM74A3Q4VXF1 159 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 SOHLH1Q5JUK2 328 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 ZNF705AQ6ZN79 300 aaPredicted RBP8.09□□□□□ -1.11
VCP-204ENST00000466100 SBSPONQ8IVN8 264 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 C20orf144Q9BQM9 153 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 TM2D3Q9BRN9 247 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.11
VCP-204ENST00000466100 TMEM218A2RU14 115 aa8.08□□□□□ -1.12
VCP-204ENST00000466100 PFN1P07737 140 aaKnown RBP8.08□□□□□ -1.12
VCP-204ENST00000466100 LINC01551Q86U37 167 aa8.08□□□□□ -1.12
VCP-204ENST00000466100 OCC1Q8TAD7 63 aa8.08□□□□□ -1.12
VCP-204ENST00000466100 RNF183Q96D59 192 aa8.08□□□□□ -1.12
VCP-204ENST00000466100 B9D2Q9BPU9 175 aa8.08□□□□□ -1.12
VCP-204ENST00000466100 C11orf21Q9P2W6 132 aa8.08□□□□□ -1.12
VCP-204ENST00000466100 TP53TG1Q9Y2A0 90 aa8.08□□□□□ -1.12
VCP-204ENST00000466100 TRAV21A0A0B4J279 112 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 C19orf71A6NCJ1 209 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 SH2D1AO60880 128 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 SLC7A5P1Q8MH63 180 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 TMEM256Q8N2U0 113 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 RCHY1Q96PM5 261 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 OVOL2Q9BRP0 275 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 LINC00467Q9BRT7 94 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 RETNQ9HD89 108 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 X6R8D5 127 aa8.07□□□□□ -1.12
VCP-204ENST00000466100 H7BYZ3 331 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 RPL23P62829 140 aaKnown RBP8.06□□□□□ -1.12
VCP-204ENST00000466100 OR5I1Q13606 314 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 TMEM241Q24JQ0 296 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 TDRG1Q3Y452 100 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 C10orf91Q5T1B1 145 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 FAM162BQ5T6X4 162 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 ZNF575Q86XF7 245 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 NIPSNAP3BQ9BS92 247 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 SDF2L1Q9HCN8 221 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 NAT8Q9UHE5 227 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 GOLT1BQ9Y3E0 138 aa8.06□□□□□ -1.12
VCP-204ENST00000466100 DYNC2H1Q8NCM8 4307 aaKnown RBP8.05□□□□□ -1.12
VCP-204ENST00000466100 IGHV1OR15-1A0A075B7D0 117 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 FABP5P3A8MUU1 101 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 SPRY2O43597 315 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 PRM2P04554 102 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 MGST1P10620 155 aaKnown RBP8.05□□□□□ -1.12
VCP-204ENST00000466100 NDUFA5Q16718 116 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 PRR27Q6MZM9 219 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 NEU1Q99519 415 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 PYGO2Q9BRQ0 406 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 SEC11CQ9BY50 192 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 MUC4Q99102 2169 aa8.05□□□□□ -1.12
VCP-204ENST00000466100 IGKV3D-20A0A0C4DH25 116 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 ANXA2RQ3ZCQ2 193 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 LINC01559Q495D7 138 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 FAM231DQ6ZW35 169 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 Q8NAQ8 132 aa8.04□□□□□ -1.12
VCP-204ENST00000466100 OR11H2Q8NH07 326 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms