RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 RNF222A6NCQ9 220 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 SMLR1H3BR10 107 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 OR10J4P0C629 311 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 CT45A10P0DMU9 189 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 RAB2AP61019 212 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 NUTF2P61970 127 aaKnown RBP3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 RAB31Q13636 194 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 TMEM41BQ5BJD5 291 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 PRR9Q5T870 116 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 LCN15Q6UWW0 184 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 Q6ZRG5 221 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 SSX7Q7RTT5 188 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 AKAP14Q86UN6 197 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 RPP25LQ8N5L8 163 aaKnown RBP3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 INO80EQ8NBZ0 244 aaPredicted RBP3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 OR1L4Q8NGR5 311 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 OR2T35Q8NGX2 323 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 LRRC20Q8TCA0 184 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 BLNKQ8WV28 456 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 FXYD5Q96DB9 178 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 PHYHIPLQ96FC7 376 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 IGF2BP2-AS1Q96M15 143 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 PFDN5Q99471 154 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 VGLL1Q99990 258 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 APLNQ9ULZ1 77 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 RNF24Q9Y225 148 aa3.39□□□□□ -1.87
EXOSC3-204ENST00000465860 BIRC6Q9NR09 4857 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 IGKV2-40A0A087WW87 121 aaPredicted RBP3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 FXYD6-FXYD2A0A087WZ82 144 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 NUPR2A6NF83 97 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 IGLL5B9A064 214 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 BOLA2-SMG1P6H3BVE0 249 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 HMGB3O15347 200 aaKnown RBP3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 MPDU1O75352 247 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 LY6G6CO95867 125 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 IGKV2D-40P01614 121 aaPredicted RBP3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 HIST1H1EP10412 219 aaKnown RBP3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 CXCL2P19875 107 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 RHOBP62745 196 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF266Q14584 549 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 FFAR4Q5NUL3 377 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 FAM222AQ5U5X8 452 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 FAM122CQ6P4D5 195 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 FAM19A4Q96LR4 140 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 SLC50A1Q9BRV3 221 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 AGPAT4-IT1Q9H0P7 198 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 SH3BGRL3Q9H299 93 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 TMEM14CQ9P0S9 112 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 FUT9Q9Y231 359 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 YTHDF2Q9Y5A9 579 aaKnown RBP3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 PKHD1P08F94 4074 aa3.38□□□□□ -1.87
EXOSC3-204ENST00000465860 IGLV5-37A0A075B6J1 123 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 IGHV4-4A0A075B6R2 117 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 BORCS7-ASMTA0A0B4J1R7 106 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 TRAV12-3A0A0B4J271 114 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 C17orf112F2Z3M2 114 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF253O75346 499 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 DUSP14O95147 198 aaKnown RBP3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 IFNA5P01569 189 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 HTN1P15515 57 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 ATP6V0CP27449 155 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 EIF5AP63241 154 aaKnown RBP3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 CD300CQ08708 224 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 SAMD13Q5VXD3 122 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 RPL7L1Q6DKI1 246 aaKnown RBP3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 TCTE3Q8IZS6 198 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 HSD17B11Q8NBQ5 300 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 OR11H4Q8NGC9 324 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 Q8TAT8 98 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 AQP10Q96PS8 301 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 PAXXQ9BUH6 204 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 OR51M1Q9H341 326 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 TNFSF18Q9UNG2 199 aa3.37□□□□□ -1.87
EXOSC3-204ENST00000465860 DEFB131BA0A096LNP1 70 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 TRAV10A0A0B4J240 114 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 KANTRA0A1W2PQU2 76 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 SMIM9A6NGZ8 99 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 KLLNB2CW77 178 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 TAAR5O14804 337 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 OR7C2O60412 319 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 PFDN1O60925 122 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF324O75467 553 aaPredicted RBP3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 INSP01308 110 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 HBE1P02100 147 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 HTN3P15516 51 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 CDKN1BP46527 198 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 RANP62826 216 aaKnown RBP3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 BTN1A1Q13410 526 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 PDE6HQ13956 83 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF345Q14585 488 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF726P1Q15940 193 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 GUK1Q16774 197 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 RRN3P1Q2M238 152 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 ZFP69Q49AA0 526 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 SERTAD4-AS1Q5TG53 156 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 SMIM29Q86T20 159 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 ZFAND2AQ8N6M9 145 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 OR10J6PQ8NGY7 276 aa3.36□□□□□ -1.87
EXOSC3-204ENST00000465860 SCGB1C1Q8TD33 95 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms