RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.13
NPHP3-203ENST00000465756 AQP10Q96PS8 301 aa7.96□□□□□ -1.13
NPHP3-203ENST00000465756 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.13
NPHP3-203ENST00000465756 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.13
NPHP3-203ENST00000465756 SNHG12Q9BXW3 62 aa7.96□□□□□ -1.13
NPHP3-203ENST00000465756 HOXA5P20719 270 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 SMIM7Q9BQ49 75 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 SH3BGRL3Q9H299 93 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 IGKV1OR2-108A0A075B7D4 117 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 SERTM2A0A1B0GWG4 89 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 RNF222A6NCQ9 220 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 BTF3P20290 206 aaKnown RBP7.96□□□□□ -1.14
NPHP3-203ENST00000465756 OR8A1Q8NGG7 326 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 OR2D3Q8NGH3 330 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 OVOL2Q9BRP0 275 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 NDUFAF3Q9BU61 184 aa7.96□□□□□ -1.14
NPHP3-203ENST00000465756 A0A0J9YX75 114 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 ARL16Q0P5N6 197 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 SAPCD1Q5SSQ6 148 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 C11orf45Q8TAV5 145 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 IGF2BP2-AS1Q96M15 143 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 C11orf1Q9H5F2 150 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 TENM1Q9UKZ4 2725 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 CXCL1P09341 107 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 F6UZH7 168 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 G3V3Q6 166 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 FAM3BP58499 235 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-203ENST00000465756 ZNF493Q6ZR52 646 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 ODF3Q96PU9 254 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 NEU1Q99519 415 aa7.95□□□□□ -1.14
NPHP3-203ENST00000465756 IGKV3-20P01619 116 aa7.94□□□□□ -1.14
NPHP3-203ENST00000465756 SPART-AS1P0CW21 52 aa7.94□□□□□ -1.14
NPHP3-203ENST00000465756 UBE2G2P60604 165 aa7.94□□□□□ -1.14
NPHP3-203ENST00000465756 SUMO1P63165 101 aaKnown RBP7.94□□□□□ -1.14
NPHP3-203ENST00000465756 UHRF2Q96PU4 802 aa7.94□□□□□ -1.14
NPHP3-203ENST00000465756 XCL2Q9UBD3 114 aa7.94□□□□□ -1.14
NPHP3-203ENST00000465756 NBEAP1P0C6P0 100 aa7.94□□□□□ -1.14
NPHP3-203ENST00000465756 ARL2-SNX15V9GYD0 113 aa7.94□□□□□ -1.14
NPHP3-203ENST00000465756 IGHV3OR16-12A0A075B7B8 117 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 OR10G4Q8NGN3 311 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 OR10G9Q8NGN4 311 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 OR10G7Q8NGN6 311 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 LINC01587Q99440 93 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 ZNF331Q9NQX6 463 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-203ENST00000465756 PRR27Q6MZM9 219 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 BLNKQ8WV28 456 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 HIST1H2BLQ99880 126 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 RPL19P84098 196 aaKnown RBP7.93□□□□□ -1.14
NPHP3-203ENST00000465756 COL5A1-AS1Q5SY13 56 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 RNASE8Q8TDE3 154 aaKnown RBP7.93□□□□□ -1.14
NPHP3-203ENST00000465756 NAA38Q9BRA0 125 aaKnown RBP7.93□□□□□ -1.14
NPHP3-203ENST00000465756 ALKBH7Q9BT30 221 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-203ENST00000465756 RETNQ9HD89 108 aa7.93□□□□□ -1.14
NPHP3-203ENST00000465756 RNF126Q9BV68 326 aa7.92□□□□□ -1.14
NPHP3-203ENST00000465756 TRAV10A0A0B4J240 114 aa7.92□□□□□ -1.14
NPHP3-203ENST00000465756 CDKN1BP46527 198 aa7.92□□□□□ -1.14
NPHP3-203ENST00000465756 CNN1P51911 297 aaKnown RBP7.92□□□□□ -1.14
NPHP3-203ENST00000465756 NUDT11Q96G61 164 aa7.92□□□□□ -1.14
NPHP3-203ENST00000465756 SNURFLB1AK76 121 aa7.92□□□□□ -1.14
NPHP3-203ENST00000465756 H0YIZ8 118 aa7.92□□□□□ -1.14
NPHP3-203ENST00000465756 OTORQ9NRC9 128 aa7.92□□□□□ -1.14
NPHP3-203ENST00000465756 A0A0J9YWU9 116 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 CXorf1O96002 111 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 SLC25A5P05141 298 aaKnown RBP7.91□□□□□ -1.14
NPHP3-203ENST00000465756 TRBV19A0A075B6N1 114 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 RBFOX3A6NFN3 312 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 TRBV7-9A0A0J9YWB2 115 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 SNAI2O43623 268 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 AMTP48728 403 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 CARHSP1Q9Y2V2 147 aaKnown RBP7.91□□□□□ -1.14
NPHP3-203ENST00000465756 TRAPPC1Q9Y5R8 145 aa7.91□□□□□ -1.14
NPHP3-203ENST00000465756 SOCS3O14543 225 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 ZFAND6Q6FIF0 208 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 PATE2Q6UY27 113 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 GTF2H5Q6ZYL4 71 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 RAB24Q969Q5 203 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 EDA2RQ9HAV5 297 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 KIAA1644Q3SXP7 199 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 NAGKQ9UJ70 344 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 LENEPQ9Y5L5 61 aa7.9□□□□□ -1.14
NPHP3-203ENST00000465756 CTXND1A0A1B0GTU2 59 aa7.9□□□□□ -1.15
NPHP3-203ENST00000465756 LOC102723971A0A1B0GUV8 181 aa7.9□□□□□ -1.15
NPHP3-203ENST00000465756 ZNF345Q14585 488 aa7.9□□□□□ -1.15
NPHP3-203ENST00000465756 ICAM4Q14773 271 aa7.9□□□□□ -1.15
NPHP3-203ENST00000465756 C16orf74Q96GX8 76 aa7.9□□□□□ -1.15
NPHP3-203ENST00000465756 C2orf88Q9BSF0 95 aa7.9□□□□□ -1.15
NPHP3-203ENST00000465756 ZNF586Q9NXT0 402 aa7.9□□□□□ -1.15
NPHP3-203ENST00000465756 LYRM9A8MSI8 78 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 B4DEV8 164 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 IFNA1P01562 189 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 GPX1P07203 203 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 TCL1AP56279 114 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 DAD1P61803 113 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 TMEM183BQ1AE95 376 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 EIF4E3Q8N5X7 224 aaKnown RBP7.89□□□□□ -1.15
NPHP3-203ENST00000465756 MIR17HGQ75NE6 70 aa7.89□□□□□ -1.15
NPHP3-203ENST00000465756 RBAKDNA6NC62 111 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms