RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PYGO2Q9BRQ0 406 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 ATG101Q9BSB4 218 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 LYSTQ99698 3801 aa14.52□□□□□ -0.09
SKA3-205ENST00000465471 TRAV1-1A0A0B4J248 108 aa14.51□□□□□ -0.09
SKA3-205ENST00000465471 SPART-AS1P0CW21 52 aa14.51□□□□□ -0.09
SKA3-205ENST00000465471 NKX2-5P52952 324 aaPredicted RBP14.51□□□□□ -0.09
SKA3-205ENST00000465471 FAM222AQ5U5X8 452 aa14.51□□□□□ -0.09
SKA3-205ENST00000465471 CEMP1Q6PRD7 247 aaPredicted RBP14.51□□□□□ -0.09
SKA3-205ENST00000465471 TMEM263Q8WUH6 116 aaKnown RBP14.51□□□□□ -0.09
SKA3-205ENST00000465471 Q6AWC8 147 aa14.5□□□□□ -0.09
SKA3-205ENST00000465471 Q6ZQT7 251 aa14.5□□□□□ -0.09
SKA3-205ENST00000465471 Q6ZTC4 211 aa14.5□□□□□ -0.09
SKA3-205ENST00000465471 TMEM75Q8N9X5 138 aa14.5□□□□□ -0.09
SKA3-205ENST00000465471 FBLL1A6NHQ2 334 aaKnown RBP14.49□□□□□ -0.09
SKA3-205ENST00000465471 K7EQM0 130 aa14.49□□□□□ -0.09
SKA3-205ENST00000465471 TCEAL7Q9BRU2 100 aa14.49□□□□□ -0.09
SKA3-205ENST00000465471 LYRM9A8MSI8 78 aa14.48□□□□□ -0.09
SKA3-205ENST00000465471 C11orf94C9JXX5 98 aa14.48□□□□□ -0.09
SKA3-205ENST00000465471 PEX7O00628 323 aa14.48□□□□□ -0.09
SKA3-205ENST00000465471 HTN1P15515 57 aa14.48□□□□□ -0.09
SKA3-205ENST00000465471 ANXA2RQ3ZCQ2 193 aa14.48□□□□□ -0.09
SKA3-205ENST00000465471 HIST1H2BAQ96A08 127 aa14.48□□□□□ -0.09
SKA3-205ENST00000465471 PSG8Q9UQ74 426 aa14.48□□□□□ -0.09
SKA3-205ENST00000465471 A0A1B0GV50 99 aa14.47□□□□□ -0.09
SKA3-205ENST00000465471 PAGE4O60829 102 aa14.47□□□□□ -0.09
SKA3-205ENST00000465471 IFNA7P01567 189 aa14.47□□□□□ -0.09
SKA3-205ENST00000465471 ATP5G3P48201 142 aa14.47□□□□□ -0.09
SKA3-205ENST00000465471 FLI1Q01543 452 aaPredicted RBP14.47□□□□□ -0.09
SKA3-205ENST00000465471 ZNF767PQ75MW2 155 aa14.47□□□□□ -0.09
SKA3-205ENST00000465471 SGK494Q96LW2 274 aa14.47□□□□□ -0.09
SKA3-205ENST00000465471 PPT1P50897 306 aa14.46□□□□□ -0.09
SKA3-205ENST00000465471 CCL20P78556 96 aa14.46□□□□□ -0.09
SKA3-205ENST00000465471 EIF4E3Q8N5X7 224 aaKnown RBP14.46□□□□□ -0.09
SKA3-205ENST00000465471 C11orf72Q8NBR9 251 aa14.46□□□□□ -0.09
SKA3-205ENST00000465471 LINC00479Q96M42 142 aa14.46□□□□□ -0.09
SKA3-205ENST00000465471 TREM1Q9NP99 234 aa14.46□□□□□ -0.09
SKA3-205ENST00000465471 IGHV1OR15-1A0A075B7D0 117 aa14.45□□□□□ -0.1
SKA3-205ENST00000465471 TRAV10A0A0B4J240 114 aa14.45□□□□□ -0.1
SKA3-205ENST00000465471 CST9LP1Q5W188 147 aa14.45□□□□□ -0.1
SKA3-205ENST00000465471 KLK5Q9Y337 293 aaPredicted RBP14.45□□□□□ -0.1
SKA3-205ENST00000465471 BOLA1Q9Y3E2 137 aa14.45□□□□□ -0.1
SKA3-205ENST00000465471 TIMM8BQ9Y5J9 83 aaPredicted RBP14.45□□□□□ -0.1
SKA3-205ENST00000465471 SACSQ9NZJ4 4579 aa14.44□□□□□ -0.1
SKA3-205ENST00000465471 F6UZH7 168 aa14.44□□□□□ -0.1
SKA3-205ENST00000465471 LINC00612Q8N6U2 182 aa14.44□□□□□ -0.1
SKA3-205ENST00000465471 ZNF680Q8NEM1 530 aa14.44□□□□□ -0.1
SKA3-205ENST00000465471 NDFIP1Q9BT67 221 aa14.44□□□□□ -0.1
SKA3-205ENST00000465471 KLF12Q9Y4X4 402 aa14.44□□□□□ -0.1
SKA3-205ENST00000465471 ALMS1Q8TCU4 4167 aa14.43□□□□□ -0.1
SKA3-205ENST00000465471 TRAV34A0A0B4J273 112 aa14.43□□□□□ -0.1
SKA3-205ENST00000465471 RGS13O14921 159 aa14.43□□□□□ -0.1
SKA3-205ENST00000465471 IBA57Q5T440 356 aaKnown RBP14.43□□□□□ -0.1
SKA3-205ENST00000465471 PRNTQ86SH4 94 aa14.43□□□□□ -0.1
SKA3-205ENST00000465471 Q86TA4 180 aa14.43□□□□□ -0.1
SKA3-205ENST00000465471 C8orf49Q96NF6 230 aa14.43□□□□□ -0.1
SKA3-205ENST00000465471 MANBALQ9NQG1 85 aa14.43□□□□□ -0.1
SKA3-205ENST00000465471 TRBV6-1A0A0K0K1D8 114 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 CBY3A6NI87 242 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 DAD1P61803 113 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 DAZ2Q13117 558 aaKnown RBP14.42□□□□□ -0.1
SKA3-205ENST00000465471 TDRG1Q3Y452 100 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 SAPCD1Q5SSQ6 148 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 ALKAL2Q6UX46 152 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 NOP10Q9NPE3 64 aaKnown RBP14.42□□□□□ -0.1
SKA3-205ENST00000465471 TP53TG3Q9ULZ0 132 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 DNAH1Q9P2D7 4330 aa14.42□□□□□ -0.1
SKA3-205ENST00000465471 DEFB131BA0A096LNP1 70 aa14.41□□□□□ -0.1
SKA3-205ENST00000465471 TRAV21A0A0B4J279 112 aa14.41□□□□□ -0.1
SKA3-205ENST00000465471 TEX46H3BTG2 121 aa14.41□□□□□ -0.1
SKA3-205ENST00000465471 ZNF80P51504 273 aaPredicted RBP14.41□□□□□ -0.1
SKA3-205ENST00000465471 COX8CQ7Z4L0 72 aa14.41□□□□□ -0.1
SKA3-205ENST00000465471 C2CD4CQ8TF44 421 aa14.41□□□□□ -0.1
SKA3-205ENST00000465471 FMC1Q96HJ9 113 aa14.41□□□□□ -0.1
SKA3-205ENST00000465471 SNURFLB1AK76 121 aa14.4□□□□□ -0.1
SKA3-205ENST00000465471 TCL1AP56279 114 aa14.4□□□□□ -0.1
SKA3-205ENST00000465471 MUC21Q5SSG8 566 aa14.4□□□□□ -0.1
SKA3-205ENST00000465471 GSN-AS1Q9NRJ2 163 aa14.4□□□□□ -0.1
SKA3-205ENST00000465471 GNG13Q9P2W3 67 aa14.4□□□□□ -0.1
SKA3-205ENST00000465471 GCGP01275 180 aa14.39□□□□□ -0.11
SKA3-205ENST00000465471 TMEM183BQ1AE95 376 aa14.39□□□□□ -0.11
SKA3-205ENST00000465471 SMUG1Q53HV7 270 aa14.39□□□□□ -0.11
SKA3-205ENST00000465471 LCE6AA0A183 80 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 SCO2A0A1W2PP80 73 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 LTAP01374 205 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 PFN1P07737 140 aaKnown RBP14.38□□□□□ -0.11
SKA3-205ENST00000465471 DEFB130BP0DP73 79 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 DEFB130AP0DP74 79 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 AKR1C3P42330 323 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 TCTAP57738 103 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 FAM159AQ6UWV7 190 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 TXNDC17Q9BRA2 123 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 ZFP30Q9Y2G7 519 aa14.38□□□□□ -0.11
SKA3-205ENST00000465471 UBE2G1P62253 170 aa14.37□□□□□ -0.11
SKA3-205ENST00000465471 LYPD6BQ8NI32 183 aa14.37□□□□□ -0.11
SKA3-205ENST00000465471 C11orf52Q96A22 123 aa14.37□□□□□ -0.11
SKA3-205ENST00000465471 C11orf21Q9P2W6 132 aa14.37□□□□□ -0.11
SKA3-205ENST00000465471 RYR3Q15413 4870 aa14.37□□□□□ -0.11
SKA3-205ENST00000465471 RYR2Q92736 4967 aa14.36□□□□□ -0.11
SKA3-205ENST00000465471 TRGV11A0A075B6L2 103 aa14.36□□□□□ -0.11
SKA3-205ENST00000465471 SPINK4O60575 86 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms