RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ACTL10Q5JWF8 245 aa10.4□□□□□ -0.74
HDAC6-215ENST00000465457 NRN1Q9NPD7 142 aa10.4□□□□□ -0.74
HDAC6-215ENST00000465457 SMPXQ9UHP9 88 aa10.4□□□□□ -0.74
HDAC6-215ENST00000465457 KIAA1109Q2LD37 5005 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 IGHV3-66A0A0C4DH42 116 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 Q6AWC8 147 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 LCNL1Q6ZST4 164 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 ATP5L2Q7Z4Y8 100 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 EDA2RQ9HAV5 297 aa10.39□□□□□ -0.75
HDAC6-215ENST00000465457 ZNF256Q9Y2P7 627 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-215ENST00000465457 XKRY2A2RUG3 117 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 C5orf52A6NGY3 159 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 CCL24O00175 119 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 PHOX2AO14813 284 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BKO60814 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BJP06899 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BOP23527 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BBP33778 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BDP58876 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BCP62807 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST2H2BEQ16778 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-215ENST00000465457 C4orf3Q8WVX3 66 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BHQ93079 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 SGK494Q96LW2 274 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BNQ99877 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 HIST1H2BMQ99879 126 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 GNB1LQ9BYB4 327 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 PPP1R14DQ9NXH3 145 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 ZMAT5Q9UDW3 170 aaKnown RBP10.38□□□□□ -0.75
HDAC6-215ENST00000465457 LENEPQ9Y5L5 61 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 TRAPPC1Q9Y5R8 145 aa10.38□□□□□ -0.75
HDAC6-215ENST00000465457 IGKV2-40A0A087WW87 121 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-215ENST00000465457 IGHV3-49A0A0A0MS15 119 aa10.37□□□□□ -0.75
HDAC6-215ENST00000465457 UBE2CO00762 179 aa10.37□□□□□ -0.75
HDAC6-215ENST00000465457 OVOL1O14753 267 aa10.37□□□□□ -0.75
HDAC6-215ENST00000465457 IGKV2D-40P01614 121 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-215ENST00000465457 RPS20P60866 119 aaKnown RBP10.37□□□□□ -0.75
HDAC6-215ENST00000465457 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
HDAC6-215ENST00000465457 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
HDAC6-215ENST00000465457 FRZBQ92765 325 aa10.37□□□□□ -0.75
HDAC6-215ENST00000465457 ZC2HC1AQ96GY0 325 aa10.37□□□□□ -0.75
HDAC6-215ENST00000465457 IGHV3OR16-13A0A075B7E8 117 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 IGHV3-74A0A0B4J1X5 117 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 TRAV8-2A0A0B4J237 113 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 HLA-DQA1P01909 254 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 TRGC1P0CF51 173 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 ID1P41134 155 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 TMEM78Q5T7P6 136 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 NEU1Q99519 415 aa10.36□□□□□ -0.75
HDAC6-215ENST00000465457 A0A1B0GW15 77 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 RBMY1BA6NDE4 496 aaKnown RBP10.35□□□□□ -0.75
HDAC6-215ENST00000465457 RBMY1EA6NEQ0 496 aaKnown RBP10.35□□□□□ -0.75
HDAC6-215ENST00000465457 SOCS3O14543 225 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 S100A8P05109 93 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 RBMY1DP0C7P1 496 aaKnown RBP10.35□□□□□ -0.75
HDAC6-215ENST00000465457 ZNF138P52744 262 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 TCL1AP56279 114 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 SNRPEP62304 92 aaKnown RBP10.35□□□□□ -0.75
HDAC6-215ENST00000465457 TM4SF20Q53R12 229 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 RBPMS2Q6ZRY4 209 aaKnown RBP10.35□□□□□ -0.75
HDAC6-215ENST00000465457 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 ZNF738Q8NE65 137 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 OR2D3Q8NGH3 330 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
HDAC6-215ENST00000465457 IGHV4OR15-8A0A075B7B6 117 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 A0A087WW49 117 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 TMEM213A2RRL7 107 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 HIGD1CA8MV81 97 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 LINC01619G3V211 115 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 FOXA3P55318 350 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-215ENST00000465457 RPL11P62913 178 aaKnown RBP10.34□□□□□ -0.75
HDAC6-215ENST00000465457 FABP9Q0Z7S8 132 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 TCF24Q7RTU0 167 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 RNF182Q8N6D2 247 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 LINC00477Q96M19 166 aa10.34□□□□□ -0.75
HDAC6-215ENST00000465457 ZNF705FA8MVS1 300 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-215ENST00000465457 SNURFLB1AK76 121 aa10.33□□□□□ -0.76
HDAC6-215ENST00000465457 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-215ENST00000465457 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
HDAC6-215ENST00000465457 NDUFA6P56556 154 aa10.33□□□□□ -0.76
HDAC6-215ENST00000465457 KLF5Q13887 457 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-215ENST00000465457 COA6Q5JTJ3 125 aaKnown RBP10.33□□□□□ -0.76
HDAC6-215ENST00000465457 LINC00322Q6ZN03 302 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-215ENST00000465457 NUP35Q8NFH5 326 aa10.33□□□□□ -0.76
HDAC6-215ENST00000465457 BORCS7Q96B45 105 aa10.33□□□□□ -0.76
HDAC6-215ENST00000465457 VGLL1Q99990 258 aa10.33□□□□□ -0.76
HDAC6-215ENST00000465457 MRPL18Q9H0U6 180 aaKnown RBP10.33□□□□□ -0.76
HDAC6-215ENST00000465457 TMEM189A5PLL7 270 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 HOXA5P20719 270 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 SYNJ2BPP57105 145 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 HBBP68871 147 aa10.32□□□□□ -0.76
HDAC6-215ENST00000465457 HIST1H1AQ02539 215 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms