RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 C11orf21Q9P2W6 132 aa14.05□□□□□ -0.16
SYNE4-204ENST00000465425 TAX1BP3O14907 124 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 GAS8-AS1O95177 125 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 C9orf47Q6ZRZ4 202 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 C2orf91Q6ZV80 131 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 WFDC3Q8IUB2 231 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 C18orf15Q96N68 181 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 LEPP41159 167 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 NPFFR1Q9GZQ6 430 aa14.04□□□□□ -0.16
SYNE4-204ENST00000465425 OR4C5Q8NGB2 326 aa14.03□□□□□ -0.16
SYNE4-204ENST00000465425 PIMREGQ9BSJ6 248 aa14.03□□□□□ -0.16
SYNE4-204ENST00000465425 TCTAP57738 103 aa14.03□□□□□ -0.16
SYNE4-204ENST00000465425 C9orf139Q6ZV77 190 aa14.03□□□□□ -0.16
SYNE4-204ENST00000465425 ERASQ7Z444 233 aa14.03□□□□□ -0.16
SYNE4-204ENST00000465425 ZFHX3Q15911 3703 aa14.03□□□□□ -0.16
SYNE4-204ENST00000465425 FCER1GP30273 86 aa14.02□□□□□ -0.16
SYNE4-204ENST00000465425 C19orf54Q5BKX5 351 aa14.02□□□□□ -0.16
SYNE4-204ENST00000465425 PIFOQ8TCI5 191 aa14.02□□□□□ -0.16
SYNE4-204ENST00000465425 PRORYQ9H606 182 aa14.02□□□□□ -0.16
SYNE4-204ENST00000465425 UFC1Q9Y3C8 167 aa14.02□□□□□ -0.16
SYNE4-204ENST00000465425 CBY3A6NI87 242 aa14.02□□□□□ -0.17
SYNE4-204ENST00000465425 CD5LO43866 347 aa14.02□□□□□ -0.17
SYNE4-204ENST00000465425 CRIP2P52943 208 aaPredicted RBP14.02□□□□□ -0.17
SYNE4-204ENST00000465425 FOXE3Q13461 319 aa14.02□□□□□ -0.17
SYNE4-204ENST00000465425 SPANXN1Q5VSR9 72 aa14.02□□□□□ -0.17
SYNE4-204ENST00000465425 PPP1R14DQ9NXH3 145 aa14.02□□□□□ -0.17
SYNE4-204ENST00000465425 LINC01546A6NGU7 62 aa14.01□□□□□ -0.17
SYNE4-204ENST00000465425 FGF6P10767 208 aa14.01□□□□□ -0.17
SYNE4-204ENST00000465425 GATA1P15976 413 aaPredicted RBP14.01□□□□□ -0.17
SYNE4-204ENST00000465425 GLMPQ8WWB7 406 aa14.01□□□□□ -0.17
SYNE4-204ENST00000465425 IGHV7-4-1A0A0J9YVY3 117 aa14.01□□□□□ -0.17
SYNE4-204ENST00000465425 TMEM97Q5BJF2 176 aa14.01□□□□□ -0.17
SYNE4-204ENST00000465425 IGHV4-61A0A0C4DH41 118 aa14□□□□□ -0.17
SYNE4-204ENST00000465425 BOD1L2Q8IYS8 172 aa14□□□□□ -0.17
SYNE4-204ENST00000465425 DKK2Q9UBU2 259 aa14□□□□□ -0.17
SYNE4-204ENST00000465425 ITPR1Q14643 2758 aa14□□□□□ -0.17
SYNE4-204ENST00000465425 NMUP48645 174 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 LY6EQ16553 131 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 OR2K2Q8NGT1 345 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 MEGF9Q9H1U4 602 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 NDUFA4O00483 81 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 SMAD7O15105 426 aaKnown RBP13.99□□□□□ -0.17
SYNE4-204ENST00000465425 PRSS1P07477 247 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 SEC11AP67812 179 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 UNQ9165/PRO28630Q6UXU0 137 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 Q8N8P6 123 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 CCL19Q99731 98 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 LENEPQ9Y5L5 61 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 VPS13CQ709C8 3753 aa13.99□□□□□ -0.17
SYNE4-204ENST00000465425 TRBV12-3P01733 135 aa13.98□□□□□ -0.17
SYNE4-204ENST00000465425 IGF1P05019 195 aa13.98□□□□□ -0.17
SYNE4-204ENST00000465425 OR9G4Q8NGQ1 327 aa13.98□□□□□ -0.17
SYNE4-204ENST00000465425 A1L4Q6 167 aa13.98□□□□□ -0.17
SYNE4-204ENST00000465425 Q6ZQT7 251 aa13.98□□□□□ -0.17
SYNE4-204ENST00000465425 TMEM158Q8WZ71 300 aa13.98□□□□□ -0.17
SYNE4-204ENST00000465425 H3BVH4 76 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 J3KRW8 73 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 IGHV4-38-2P0DP08 117 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 OR10J6PQ8NGY7 276 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 C20orf173Q96LM9 149 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 LINC00477Q96M19 166 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 TRAV26-2A0A0B4J265 109 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 C7orf71A4D174 169 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 RPL11P62913 178 aaKnown RBP13.97□□□□□ -0.17
SYNE4-204ENST00000465425 USMG5Q96IX5 58 aa13.97□□□□□ -0.17
SYNE4-204ENST00000465425 H3BUX3 64 aa13.96□□□□□ -0.17
SYNE4-204ENST00000465425 IGHV3-11P01762 117 aa13.96□□□□□ -0.17
SYNE4-204ENST00000465425 CLEC2AQ6UVW9 174 aa13.96□□□□□ -0.17
SYNE4-204ENST00000465425 PEF1Q9UBV8 284 aaKnown RBP13.96□□□□□ -0.17
SYNE4-204ENST00000465425 IGHV4-4A0A075B6R2 117 aa13.96□□□□□ -0.18
SYNE4-204ENST00000465425 SIVA1O15304 175 aa13.96□□□□□ -0.18
SYNE4-204ENST00000465425 ODF1Q14990 250 aa13.96□□□□□ -0.18
SYNE4-204ENST00000465425 PRR9Q5T870 116 aa13.96□□□□□ -0.18
SYNE4-204ENST00000465425 C10orf105Q8TEF2 133 aa13.96□□□□□ -0.18
SYNE4-204ENST00000465425 CBY1Q9Y3M2 126 aa13.96□□□□□ -0.18
SYNE4-204ENST00000465425 CELSR1Q9NYQ6 3014 aa13.96□□□□□ -0.18
SYNE4-204ENST00000465425 H3BUA1 57 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 IGHG2P01859 326 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 AMMECR1LQ6DCA0 310 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 SPTAN1Q13813 2472 aaKnown RBP13.95□□□□□ -0.18
SYNE4-204ENST00000465425 ABCA2Q9BZC7 2435 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 IGLV2-18A0A075B6J9 118 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 A6NDN8 102 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 NDUFS8O00217 210 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 OVOL1O14753 267 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 PF4V1P10720 104 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 HSD52Q0P140 79 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 PSMG4Q5JS54 123 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 PCP2Q8IVA1 136 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 FOXC2Q99958 501 aa13.95□□□□□ -0.18
SYNE4-204ENST00000465425 TRAV21A0A0B4J279 112 aa13.94□□□□□ -0.18
SYNE4-204ENST00000465425 ATP5LO75964 103 aa13.94□□□□□ -0.18
SYNE4-204ENST00000465425 LAGE3Q14657 143 aa13.94□□□□□ -0.18
SYNE4-204ENST00000465425 NRACQ8N912 160 aa13.94□□□□□ -0.18
SYNE4-204ENST00000465425 OR4X2Q8NGF9 303 aa13.94□□□□□ -0.18
SYNE4-204ENST00000465425 IGKCP01834 107 aa13.93□□□□□ -0.18
SYNE4-204ENST00000465425 SMIM17P0DL12 118 aa13.93□□□□□ -0.18
SYNE4-204ENST00000465425 S100A4P26447 101 aaKnown RBP13.93□□□□□ -0.18
SYNE4-204ENST00000465425 GPHB5Q86YW7 130 aa13.93□□□□□ -0.18
SYNE4-204ENST00000465425 ATP5J2P56134 94 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms