RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SHANK2-AS3Q9BTD1 123 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 GNB1LQ9BYB4 327 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 NMES1Q9C002 83 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 MANBALQ9NQG1 85 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 SLC39A9Q9NUM3 307 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 TAC3Q9UHF0 121 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 RPUSD1Q9UJJ7 312 aaKnown RBP1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 STRCQ7RTU9 1775 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 CCDC88CQ9P219 2028 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 PLCH1Q4KWH8 1693 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 TOPAZ1Q8N9V7 1692 aa1.89□□□□□ -2.11
HMGXB4-205ENST00000464480 DOCK1Q14185 1865 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 NUP205Q92621 2012 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 SLIT1O75093 1534 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 TET3O43151 1660 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 MYOM1P52179 1685 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 A0A0J9YW62 118 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 LOC389332A0A1B0GUA5 103 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 FAM236AA0A1B0GUQ0 79 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 FAM236BA0A1B0GV22 79 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 ZNF736B4DX44 427 aaPredicted RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 ATOX1O00244 68 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 CST7O76096 145 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 FSTL3O95633 263 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 IGKV5-2P06315 115 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 COX7CP15954 63 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 CTLA4P16410 223 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 KRTAP10-1P60331 282 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 NPC2P61916 151 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 SNRPGP62308 76 aaKnown RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 FKBP1AP62942 108 aaKnown RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 MRPS36P82909 103 aaKnown RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 FOXF1Q12946 379 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 ZNF791Q3KP31 576 aaPredicted RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 SPRNQ5BIV9 151 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 CLLU1OSQ5K130 101 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 C22orf39Q6P5X5 142 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 CYP2G1PQ6ZSU1 146 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 LHFPL1Q86WI0 220 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 TEN1Q86WV5 123 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 PRR15Q8IV56 129 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 LMX1AQ8TE12 382 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 BRK1Q8WUW1 75 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 ITLN2Q8WWU7 325 aaPredicted RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 C20orf78Q9BR46 151 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 AGPAT4-IT1Q9H0P7 198 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 BCL2L10Q9HD36 194 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 TAAR3PQ9P1P4 343 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 CKLFQ9UBR5 152 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 PCTPQ9UKL6 214 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 LSM2Q9Y333 95 aaKnown RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 PXMP4Q9Y6I8 212 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 SERP1Q9Y6X1 66 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 SVILO95425 2214 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 ANK1P16157 1881 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 BRCA1P38398 1863 aaKnown RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 DSPPQ9NZW4 1301 aa1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 DNMT1P26358 1616 aaKnown RBP1.88□□□□□ -2.11
HMGXB4-205ENST00000464480 SHPRHQ149N8 1683 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 SBF2Q86WG5 1849 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 IGKV3D-11A0A0A0MRZ8 115 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 TRBV7-6A0A0J9YX20 115 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 TRBV7-7A0A0K0K1E9 115 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 GRIFINA4D1Z8 144 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 LY6LH3BQJ8 138 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 UBE2L6O14933 153 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 SEC16AO15027 2179 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 NDUFB3O43676 98 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 COX7A2P2O60397 106 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 NDUFB2O95178 105 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 IGHV3-7P01780 117 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 GYPBP06028 91 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 C3orf79P0CE67 100 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 INAFM2P0DMQ5 153 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 SCGB1C2P0DMR2 95 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 COX8AP10176 69 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 COX6A1P12074 109 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 LGALS3P17931 250 aaKnown RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 CBLN1P23435 193 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 FKBP2P26885 142 aaKnown RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 HLA-DMBP28068 263 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 DAPP51397 102 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 CCL23P55773 120 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 ATP5EP56381 51 aaPredicted RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 UBE2G1P62253 170 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 SNRPFP62306 86 aaKnown RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 UBE2L3P68036 154 aaKnown RBP1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 QRFPP83859 136 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 QSER1Q2KHR3 1735 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 NMSQ5H8A3 153 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 NUP188Q5SRE5 1749 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 LINC00305Q7Z4B0 112 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 UBR1Q8IWV7 1749 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 AMN1Q8IY45 258 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 DOCK3Q8IZD9 2030 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 LY6G5BQ8NDX9 201 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 TM2D3Q9BRN9 247 aa1.87□□□□□ -2.11
HMGXB4-205ENST00000464480 AICDAQ9GZX7 198 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms