RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ANK1P16157 1881 aa0.16□□□□□ -2.38
PTPN12-210ENST00000464313 DLC1Q96QB1 1528 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 TRBV27A0A0K0K1C4 114 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 SAA1P0DJI8 122 aaPredicted RBP0.15□□□□□ -2.39
PTPN12-210ENST00000464313 EVI2AP22794 236 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 FXYD3Q14802 87 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 ASB16-AS1Q495Z4 193 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 SPINK6Q6UWN8 80 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 MRPL36Q9P0J6 103 aaKnown RBP0.15□□□□□ -2.39
PTPN12-210ENST00000464313 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
PTPN12-210ENST00000464313 TRPM7Q96QT4 1865 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 KIAA1549LQ6ZVL6 1849 aa0.15□□□□□ -2.39
PTPN12-210ENST00000464313 USP54Q70EL1 1684 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 MAST4O15021 2626 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 TRAV13-1A0A0B4J241 112 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 NBDYA0A0U1RRE5 68 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 ARL5CA6NH57 179 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 H3BMG7 143 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 SLC25A4P12235 298 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 TRAPPC2LQ9UL33 140 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 MPC1Q9Y5U8 109 aa0.14□□□□□ -2.39
PTPN12-210ENST00000464313 CDC42EP2O14613 210 aa0.13□□□□□ -2.39
PTPN12-210ENST00000464313 CRYGSP22914 178 aa0.13□□□□□ -2.39
PTPN12-210ENST00000464313 SPINK13Q1W4C9 94 aa0.13□□□□□ -2.39
PTPN12-210ENST00000464313 MORN4Q8NDC4 146 aa0.13□□□□□ -2.39
PTPN12-210ENST00000464313 LXNQ9BS40 222 aa0.13□□□□□ -2.39
PTPN12-210ENST00000464313 MED31Q9Y3C7 131 aa0.13□□□□□ -2.39
PTPN12-210ENST00000464313 TCOF1Q13428 1488 aaKnown RBP0.13□□□□□ -2.39
PTPN12-210ENST00000464313 FAM135BQ49AJ0 1406 aa0.13□□□□□ -2.39
PTPN12-210ENST00000464313 BDP1A6H8Y1 2624 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 ROCK1Q13464 1354 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 LOC107986453A0A1B0GWG9 222 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 IGKCP01834 107 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 RPL7P18124 248 aaKnown RBP0.12□□□□□ -2.39
PTPN12-210ENST00000464313 DNAJB13P59910 316 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 RPL37P61927 97 aaKnown RBP0.12□□□□□ -2.39
PTPN12-210ENST00000464313 BLCAPP62952 87 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 C5orf56Q8N8D9 126 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 CBLN4Q9NTU7 201 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 MRPL35Q9NZE8 188 aaKnown RBP0.12□□□□□ -2.39
PTPN12-210ENST00000464313 NINQ8N4C6 2090 aa0.12□□□□□ -2.39
PTPN12-210ENST00000464313 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.11□□□□□ -2.39
PTPN12-210ENST00000464313 M0QZK8 103 aa0.11□□□□□ -2.39
PTPN12-210ENST00000464313 FXYD1O00168 92 aa0.11□□□□□ -2.39
PTPN12-210ENST00000464313 EDF1O60869 148 aaKnown RBP0.11□□□□□ -2.39
PTPN12-210ENST00000464313 IL7P13232 177 aa0.11□□□□□ -2.39
PTPN12-210ENST00000464313 GTF2A1P52655 376 aaPredicted RBP0.11□□□□□ -2.39
PTPN12-210ENST00000464313 OR51A4Q8NGJ6 313 aa0.11□□□□□ -2.39
PTPN12-210ENST00000464313 THEM6Q8WUY1 208 aa0.11□□□□□ -2.39
PTPN12-210ENST00000464313 ATPIF1Q9UII2 106 aa0.11□□□□□ -2.39
PTPN12-210ENST00000464313 TMEM30CPA0ZSE6 113 aa0.1□□□□□ -2.39
PTPN12-210ENST00000464313 PFDN1O60925 122 aa0.1□□□□□ -2.39
PTPN12-210ENST00000464313 IGF2P01344 180 aa0.1□□□□□ -2.39
PTPN12-210ENST00000464313 POLR2HP52434 150 aaKnown RBP0.1□□□□□ -2.39
PTPN12-210ENST00000464313 IQCJQ1A5X6 159 aa0.1□□□□□ -2.39
PTPN12-210ENST00000464313 DEFB132Q7Z7B7 95 aa0.1□□□□□ -2.39
PTPN12-210ENST00000464313 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.1□□□□□ -2.39
PTPN12-210ENST00000464313 OR8J3Q8NGG0 315 aa0.1□□□□□ -2.39
PTPN12-210ENST00000464313 ATG2AQ2TAZ0 1938 aa0.1□□□□□ -2.39
PTPN12-210ENST00000464313 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.1□□□□□ -2.39
PTPN12-210ENST00000464313 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.39
PTPN12-210ENST00000464313 TRBV7-6A0A0J9YX20 115 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 LOC107984640A0A0U1RRK4 108 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 TMEM189A5PLL7 270 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 HIGD1CA8MV81 97 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 E7EQ34 232 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 CCSMST1Q4G0I0 132 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 LYPD5Q6UWN5 251 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 BRK1Q8WUW1 75 aa0.09□□□□□ -2.4
PTPN12-210ENST00000464313 TPST1O60507 370 aa0.08□□□□□ -2.4
PTPN12-210ENST00000464313 SMIM7Q9BQ49 75 aa0.08□□□□□ -2.4
PTPN12-210ENST00000464313 C19orf12Q9NSK7 152 aa0.08□□□□□ -2.4
PTPN12-210ENST00000464313 FER1L6Q2WGJ9 1857 aa0.07□□□□□ -2.4
PTPN12-210ENST00000464313 IFITM5A6NNB3 132 aa0.07□□□□□ -2.4
PTPN12-210ENST00000464313 CD3DP04234 171 aa0.07□□□□□ -2.4
PTPN12-210ENST00000464313 FABP1P07148 127 aa0.07□□□□□ -2.4
PTPN12-210ENST00000464313 ETV6P41212 452 aa0.07□□□□□ -2.4
PTPN12-210ENST00000464313 SRP9P49458 86 aaKnown RBP0.07□□□□□ -2.4
PTPN12-210ENST00000464313 RHOHQ15669 191 aa0.07□□□□□ -2.4
PTPN12-210ENST00000464313 A0A0G2JMM0 328 aa0.06□□□□□ -2.4
PTPN12-210ENST00000464313 FAM107AO95990 144 aa0.06□□□□□ -2.4
PTPN12-210ENST00000464313 HBDP02042 147 aa0.06□□□□□ -2.4
PTPN12-210ENST00000464313 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
PTPN12-210ENST00000464313 RBBP6Q7Z6E9 1792 aaKnown RBP0.06□□□□□ -2.4
PTPN12-210ENST00000464313 AFDNP55196 1824 aaKnown RBP0.06□□□□□ -2.4
PTPN12-210ENST00000464313 A2MP01023 1474 aa0.05□□□□□ -2.4
PTPN12-210ENST00000464313 IGHV1-24A0A0C4DH33 117 aa0.05□□□□□ -2.4
PTPN12-210ENST00000464313 CKS2P33552 79 aa0.05□□□□□ -2.4
PTPN12-210ENST00000464313 IDO2Q6ZQW0 420 aa0.05□□□□□ -2.4
PTPN12-210ENST00000464313 OTOSQ8NHW6 89 aa0.05□□□□□ -2.4
PTPN12-210ENST00000464313 NAT14Q8WUY8 206 aa0.05□□□□□ -2.4
PTPN12-210ENST00000464313 SMPXQ9UHP9 88 aa0.05□□□□□ -2.4
PTPN12-210ENST00000464313 A0A1B0GV72 72 aa0.04□□□□□ -2.4
PTPN12-210ENST00000464313 SLC25A5P05141 298 aaKnown RBP0.04□□□□□ -2.4
PTPN12-210ENST00000464313 RPL22P35268 128 aaKnown RBP0.04□□□□□ -2.4
PTPN12-210ENST00000464313 DMAC1Q96GE9 116 aa0.04□□□□□ -2.4
PTPN12-210ENST00000464313 CCDC115Q96NT0 180 aa0.04□□□□□ -2.4
PTPN12-210ENST00000464313 ZCCHC11Q5TAX3 1644 aaKnown RBP0.04□□□□□ -2.4
PTPN12-210ENST00000464313 CPDO75976 1380 aa0.04□□□□□ -2.4
PTPN12-210ENST00000464313 MYH1P12882 1939 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms