RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MAP1LC3BQ9GZQ8 125 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 EPDR1Q9UM22 224 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 DNAH6Q9C0G6 4158 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 TEX48A0A1B0GUV7 120 aa12.54□□□□□ -0.4
VPS52-214ENST00000463486 FAM74A7A6NL05 159 aa12.54□□□□□ -0.4
VPS52-214ENST00000463486 C11orf72Q8NBR9 251 aa12.54□□□□□ -0.4
VPS52-214ENST00000463486 APLNQ9ULZ1 77 aa12.54□□□□□ -0.4
VPS52-214ENST00000463486 RPH3ALQ9UNE2 315 aa12.54□□□□□ -0.4
VPS52-214ENST00000463486 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
VPS52-214ENST00000463486 TPT1P13693 172 aaKnown RBP12.53□□□□□ -0.4
VPS52-214ENST00000463486 EIF5AP63241 154 aaKnown RBP12.53□□□□□ -0.4
VPS52-214ENST00000463486 Q6AWC8 147 aa12.53□□□□□ -0.4
VPS52-214ENST00000463486 CCDC28AQ8IWP9 274 aa12.53□□□□□ -0.4
VPS52-214ENST00000463486 C9orf62Q8N4C0 152 aa12.53□□□□□ -0.4
VPS52-214ENST00000463486 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
VPS52-214ENST00000463486 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
VPS52-214ENST00000463486 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
VPS52-214ENST00000463486 DPPA3Q6W0C5 159 aa12.52□□□□□ -0.41
VPS52-214ENST00000463486 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.41
VPS52-214ENST00000463486 LINC00476Q8WZB0 136 aa12.52□□□□□ -0.41
VPS52-214ENST00000463486 SGK494Q96LW2 274 aa12.52□□□□□ -0.41
VPS52-214ENST00000463486 NOP10Q9NPE3 64 aaKnown RBP12.52□□□□□ -0.41
VPS52-214ENST00000463486 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.41
VPS52-214ENST00000463486 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
VPS52-214ENST00000463486 IGLL5B9A064 214 aa12.51□□□□□ -0.41
VPS52-214ENST00000463486 UBE2G2P60604 165 aa12.51□□□□□ -0.41
VPS52-214ENST00000463486 EIF4E3Q8N5X7 224 aaKnown RBP12.51□□□□□ -0.41
VPS52-214ENST00000463486 FAM213BQ8TBF2 198 aa12.51□□□□□ -0.41
VPS52-214ENST00000463486 LINC00479Q96M42 142 aa12.51□□□□□ -0.41
VPS52-214ENST00000463486 IGHV1OR15-1A0A075B7D0 117 aa12.5□□□□□ -0.41
VPS52-214ENST00000463486 TCTAP57738 103 aa12.5□□□□□ -0.41
VPS52-214ENST00000463486 DAD1P61803 113 aa12.5□□□□□ -0.41
VPS52-214ENST00000463486 DAZ2Q13117 558 aaKnown RBP12.5□□□□□ -0.41
VPS52-214ENST00000463486 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
VPS52-214ENST00000463486 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
VPS52-214ENST00000463486 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
VPS52-214ENST00000463486 PSG8Q9UQ74 426 aa12.5□□□□□ -0.41
VPS52-214ENST00000463486 DNAH10Q8IVF4 4471 aa12.49□□□□□ -0.41
VPS52-214ENST00000463486 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
VPS52-214ENST00000463486 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
VPS52-214ENST00000463486 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
VPS52-214ENST00000463486 SLC51BQ86UW2 128 aa12.49□□□□□ -0.41
VPS52-214ENST00000463486 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
VPS52-214ENST00000463486 GSN-AS1Q9NRJ2 163 aa12.49□□□□□ -0.41
VPS52-214ENST00000463486 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
VPS52-214ENST00000463486 TMEM75Q8N9X5 138 aa12.48□□□□□ -0.41
VPS52-214ENST00000463486 TREM1Q9NP99 234 aa12.48□□□□□ -0.41
VPS52-214ENST00000463486 CBY3A6NI87 242 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 F6UZH7 168 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 H2AFB1P0C5Y9 115 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 CCL20P78556 96 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 FLI1Q01543 452 aaPredicted RBP12.47□□□□□ -0.41
VPS52-214ENST00000463486 TDRG1Q3Y452 100 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 ZNF680Q8NEM1 530 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 C8orf49Q96NF6 230 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 KLF12Q9Y4X4 402 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
VPS52-214ENST00000463486 TRAV1-1A0A0B4J248 108 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 TRAV34A0A0B4J273 112 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 PEX7O00628 323 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 RGS13O14921 159 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 IFNA7P01567 189 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 ATP5G3P48201 142 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 SULT1A2P50226 295 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 RAB5CP51148 216 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 TCL1AP56279 114 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 ZFP69Q49AA0 526 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 MUC21Q5SSG8 566 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 IBA57Q5T440 356 aaKnown RBP12.46□□□□□ -0.41
VPS52-214ENST00000463486 LGALS9CQ6DKI2 356 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 Q6ZTI0 123 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 HIST1H2BAQ96A08 127 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 C11orf21Q9P2W6 132 aa12.46□□□□□ -0.41
VPS52-214ENST00000463486 DNAH2Q9P225 4427 aa12.46□□□□□ -0.42
VPS52-214ENST00000463486 A0A1B0GV50 99 aa12.45□□□□□ -0.42
VPS52-214ENST00000463486 FBLL1A6NHQ2 334 aaKnown RBP12.45□□□□□ -0.42
VPS52-214ENST00000463486 SNURFLB1AK76 121 aa12.45□□□□□ -0.42
VPS52-214ENST00000463486 K7EQM0 130 aa12.45□□□□□ -0.42
VPS52-214ENST00000463486 PAGE4O60829 102 aa12.45□□□□□ -0.42
VPS52-214ENST00000463486 PRNTQ86SH4 94 aa12.45□□□□□ -0.42
VPS52-214ENST00000463486 FAM210BQ96KR6 192 aa12.45□□□□□ -0.42
VPS52-214ENST00000463486 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
VPS52-214ENST00000463486 TRAV21A0A0B4J279 112 aa12.44□□□□□ -0.42
VPS52-214ENST00000463486 SPINK4O60575 86 aa12.44□□□□□ -0.42
VPS52-214ENST00000463486 HTN3P15516 51 aa12.44□□□□□ -0.42
VPS52-214ENST00000463486 EIF5AL1Q6IS14 154 aaKnown RBP12.44□□□□□ -0.42
VPS52-214ENST00000463486 LY6G6CO95867 125 aa12.43□□□□□ -0.42
VPS52-214ENST00000463486 NKX2-5P52952 324 aaPredicted RBP12.43□□□□□ -0.42
VPS52-214ENST00000463486 TMEM88Q6PEY1 159 aa12.43□□□□□ -0.42
VPS52-214ENST00000463486 COX8CQ7Z4L0 72 aa12.43□□□□□ -0.42
VPS52-214ENST00000463486 C18orf15Q96N68 181 aa12.43□□□□□ -0.42
VPS52-214ENST00000463486 TCEAL7Q9BRU2 100 aa12.43□□□□□ -0.42
VPS52-214ENST00000463486 NDUFAF3Q9BU61 184 aa12.43□□□□□ -0.42
VPS52-214ENST00000463486 GAGE12BA1L429 117 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 GNRH2O43555 120 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 GAGE7O76087 117 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 GCGP01275 180 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 ATP5G1P05496 136 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
VPS52-214ENST00000463486 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms