RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 OR2T35Q8NGX2 323 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 Q8TAT8 98 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 ACTR3CQ9C0K3 210 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-203ENST00000463172 RPH3ALQ9UNE2 315 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 NACAE9PAV3 2078 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 IGLV2-18A0A075B6J9 118 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 TRGV11A0A075B6L2 103 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 ARL14EPLP0DKL9 152 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 ATP6V0CP27449 155 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 FAM159AQ6UWV7 190 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 Q6ZTI0 123 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 C11orf72Q8NBR9 251 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 ST6GAL2Q96JF0 529 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 C18orf15Q96N68 181 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
HDAC1-203ENST00000463172 TAAR5O14804 337 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 CXorf1O96002 111 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 STAG3L2P0CL84 134 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 STAG3L3P0CL85 134 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 SLAQ13239 276 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 Q6AWC8 147 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 GOLT1AQ6ZVE7 132 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 TMPRSS5Q9H3S3 457 aa9.18□□□□□ -0.94
HDAC1-203ENST00000463172 MUC4Q99102 2169 aa9.17□□□□□ -0.94
HDAC1-203ENST00000463172 HMGB3O15347 200 aaKnown RBP9.17□□□□□ -0.94
HDAC1-203ENST00000463172 SPINK4O60575 86 aa9.17□□□□□ -0.94
HDAC1-203ENST00000463172 PRR9Q5T870 116 aa9.17□□□□□ -0.94
HDAC1-203ENST00000463172 C5orf17Q8NAS9 161 aa9.17□□□□□ -0.94
HDAC1-203ENST00000463172 RAB24Q969Q5 203 aa9.17□□□□□ -0.94
HDAC1-203ENST00000463172 SPXQ9BT56 116 aa9.17□□□□□ -0.94
HDAC1-203ENST00000463172 KLF12Q9Y4X4 402 aa9.17□□□□□ -0.94
HDAC1-203ENST00000463172 TRAV21A0A0B4J279 112 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 A0A0J9YY99 117 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 FBLL1A6NHQ2 334 aaKnown RBP9.16□□□□□ -0.94
HDAC1-203ENST00000463172 EIF3GO75821 320 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC1-203ENST00000463172 GCHFRP30047 84 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 ZFP69Q49AA0 526 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 IQCF2Q8IXL9 164 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 KCNS1Q96KK3 526 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
HDAC1-203ENST00000463172 PRSS29PA6NIE9 313 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 HOXA5P20719 270 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 Q5BKY6 102 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 AKR1C8PQ5T2L2 129 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 C1orf134Q5TEV5 83 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 RPL7L1Q6DKI1 246 aaKnown RBP9.15□□□□□ -0.94
HDAC1-203ENST00000463172 Q6ZR54 194 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 SSX7Q7RTT5 188 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 SH3BGRL3Q9H299 93 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 NAGKQ9UJ70 344 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.94
HDAC1-203ENST00000463172 RNF222A6NCQ9 220 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 ARPC5O15511 151 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 TMEM183BQ1AE95 376 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 TMEM183AQ8IXX5 376 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 NKX6-2Q9C056 277 aaPredicted RBP9.14□□□□□ -0.95
HDAC1-203ENST00000463172 SDF2L1Q9HCN8 221 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 MRPL16Q9NX20 251 aaKnown RBP9.14□□□□□ -0.95
HDAC1-203ENST00000463172 LINC00588Q9Y4M8 146 aa9.14□□□□□ -0.95
HDAC1-203ENST00000463172 HECTD4Q9Y4D8 3996 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 A0A1W2PRE2 83 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 PAX4O43316 350 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 TCRAP04437 139 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 PPT1P50897 306 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 SUMO1P63165 101 aaKnown RBP9.13□□□□□ -0.95
HDAC1-203ENST00000463172 GNG5P63218 68 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 ZNRF2Q8NHG8 242 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 PRO0255Q9UI72 69 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 ICOSQ9Y6W8 199 aa9.13□□□□□ -0.95
HDAC1-203ENST00000463172 TRGV4A0A0C4DH28 118 aa9.12□□□□□ -0.95
HDAC1-203ENST00000463172 SAPCD1Q5SSQ6 148 aa9.12□□□□□ -0.95
HDAC1-203ENST00000463172 CYB561D1Q8N8Q1 229 aa9.12□□□□□ -0.95
HDAC1-203ENST00000463172 STOML3Q8TAV4 291 aa9.12□□□□□ -0.95
HDAC1-203ENST00000463172 Q9H8V8 135 aa9.12□□□□□ -0.95
HDAC1-203ENST00000463172 EPDR1Q9UM22 224 aa9.12□□□□□ -0.95
HDAC1-203ENST00000463172 TRAV8-1A0A0A6YYK1 113 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 F6UZH7 168 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 M0R2P5 195 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 RTL8CO15255 209 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 IFNA7P01567 189 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 Q6ZQT7 251 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 PCNPQ8WW12 178 aaKnown RBP9.11□□□□□ -0.95
HDAC1-203ENST00000463172 RASL10AQ92737 203 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 UPK3BQ9BT76 320 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 MDFICQ9P1T7 246 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 PSG8Q9UQ74 426 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
HDAC1-203ENST00000463172 MRPS16Q9Y3D3 137 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms