RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
COL9A3-203ENST00000462700 IQCF2Q8IXL9 164 aa13.29□□□□□ -0.28
COL9A3-203ENST00000462700 C5orf17Q8NAS9 161 aa13.29□□□□□ -0.28
COL9A3-203ENST00000462700 IGHV1OR15-1A0A075B7D0 117 aa13.28□□□□□ -0.28
COL9A3-203ENST00000462700 TRAV8-1A0A0A6YYK1 113 aa13.28□□□□□ -0.28
COL9A3-203ENST00000462700 A0A0D9SG52 128 aa13.28□□□□□ -0.28
COL9A3-203ENST00000462700 GGTLC3B5MD39 225 aa13.28□□□□□ -0.28
COL9A3-203ENST00000462700 RGS13O14921 159 aa13.28□□□□□ -0.28
COL9A3-203ENST00000462700 GSN-AS1Q9NRJ2 163 aa13.28□□□□□ -0.28
COL9A3-203ENST00000462700 KMT2AQ03164 3969 aa13.28□□□□□ -0.28
COL9A3-203ENST00000462700 SERTM2A0A1B0GWG4 89 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 GAGE12BA1L429 117 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 F5H768 121 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 BCL2L11O43521 198 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 GAGE7O76087 117 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 TCRAP04437 139 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 GAGE12FP0CL80 117 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 GAGE12GP0CL81 117 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 GAGE12IP0CL82 117 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 P0DMU3 169 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 FAM231AP0DMU4 169 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 FAM231CP0DMU5 169 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 SUMO1P63165 101 aaKnown RBP13.27□□□□□ -0.29
COL9A3-203ENST00000462700 Q6AWC8 147 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.29
COL9A3-203ENST00000462700 KANTRA0A1W2PQU2 76 aa13.26□□□□□ -0.29
COL9A3-203ENST00000462700 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
COL9A3-203ENST00000462700 TCL1AP56279 114 aa13.26□□□□□ -0.29
COL9A3-203ENST00000462700 IBA57Q5T440 356 aaKnown RBP13.26□□□□□ -0.29
COL9A3-203ENST00000462700 TMPRSS5Q9H3S3 457 aa13.26□□□□□ -0.29
COL9A3-203ENST00000462700 FGF8P55075 233 aaPredicted RBP13.25□□□□□ -0.29
COL9A3-203ENST00000462700 MUC21Q5SSG8 566 aa13.25□□□□□ -0.29
COL9A3-203ENST00000462700 Q6ZNX1 250 aa13.25□□□□□ -0.29
COL9A3-203ENST00000462700 Q6ZTI0 123 aa13.25□□□□□ -0.29
COL9A3-203ENST00000462700 C15orf53Q8NAA6 179 aa13.25□□□□□ -0.29
COL9A3-203ENST00000462700 TVP23CQ96ET8 276 aa13.25□□□□□ -0.29
COL9A3-203ENST00000462700 ZNF471Q9BX82 626 aaPredicted RBP13.25□□□□□ -0.29
COL9A3-203ENST00000462700 EPDR1Q9UM22 224 aa13.25□□□□□ -0.29
COL9A3-203ENST00000462700 KLF12Q9Y4X4 402 aa13.25□□□□□ -0.29
COL9A3-203ENST00000462700 MAP1LC3B2A6NCE7 125 aa13.24□□□□□ -0.29
COL9A3-203ENST00000462700 F6UZH7 168 aa13.24□□□□□ -0.29
COL9A3-203ENST00000462700 K7EQM0 130 aa13.24□□□□□ -0.29
COL9A3-203ENST00000462700 SEC11BP0C7V7 166 aa13.24□□□□□ -0.29
COL9A3-203ENST00000462700 SGK494Q96LW2 274 aa13.24□□□□□ -0.29
COL9A3-203ENST00000462700 MAP1LC3BQ9GZQ8 125 aa13.24□□□□□ -0.29
COL9A3-203ENST00000462700 TREM1Q9NP99 234 aa13.24□□□□□ -0.29
COL9A3-203ENST00000462700 UBE2G2P60604 165 aa13.23□□□□□ -0.29
COL9A3-203ENST00000462700 POM121L12Q8N7R1 296 aa13.23□□□□□ -0.29
COL9A3-203ENST00000462700 CYB561D1Q8N8Q1 229 aa13.23□□□□□ -0.29
COL9A3-203ENST00000462700 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
COL9A3-203ENST00000462700 DNAH6Q9C0G6 4158 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 TRGV1A0A0A0MS02 117 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 SPINK4O60575 86 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 PFDN1O60925 122 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 FHITP49789 147 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 FAM159AQ6UWV7 190 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 TMUB2Q71RG4 321 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 TCTE3Q8IZS6 198 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 NDFIP1Q9BT67 221 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
COL9A3-203ENST00000462700 EPPK1P58107 5090 aaKnown RBP13.22□□□□□ -0.29
COL9A3-203ENST00000462700 TRAV21A0A0B4J279 112 aa13.21□□□□□ -0.29
COL9A3-203ENST00000462700 FAM74A7A6NL05 159 aa13.21□□□□□ -0.29
COL9A3-203ENST00000462700 UMAD1C9J7I0 102 aa13.21□□□□□ -0.29
COL9A3-203ENST00000462700 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
COL9A3-203ENST00000462700 EIF5AP63241 154 aaKnown RBP13.21□□□□□ -0.29
COL9A3-203ENST00000462700 FLI1Q01543 452 aaPredicted RBP13.21□□□□□ -0.29
COL9A3-203ENST00000462700 TMEM75Q8N9X5 138 aa13.21□□□□□ -0.29
COL9A3-203ENST00000462700 C18orf15Q96N68 181 aa13.21□□□□□ -0.29
COL9A3-203ENST00000462700 NAGKQ9UJ70 344 aa13.21□□□□□ -0.29
COL9A3-203ENST00000462700 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
COL9A3-203ENST00000462700 HOXA5P20719 270 aa13.2□□□□□ -0.3
COL9A3-203ENST00000462700 TDRG1Q3Y452 100 aa13.2□□□□□ -0.3
COL9A3-203ENST00000462700 UBE2DNLQ8IWF7 75 aa13.2□□□□□ -0.3
COL9A3-203ENST00000462700 STOML3Q8TAV4 291 aa13.2□□□□□ -0.3
COL9A3-203ENST00000462700 NKX6-2Q9C056 277 aaPredicted RBP13.2□□□□□ -0.3
COL9A3-203ENST00000462700 MDFICQ9P1T7 246 aa13.2□□□□□ -0.3
COL9A3-203ENST00000462700 TRGV11A0A075B6L2 103 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 FBLL1A6NHQ2 334 aaKnown RBP13.19□□□□□ -0.3
COL9A3-203ENST00000462700 IFNA7P01567 189 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
COL9A3-203ENST00000462700 OR5I1Q13606 314 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 TMEM183BQ1AE95 376 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 LGALS9BQ3B8N2 356 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 PRNTQ86SH4 94 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 TMEM183AQ8IXX5 376 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 C8orf49Q96NF6 230 aa13.19□□□□□ -0.3
COL9A3-203ENST00000462700 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
COL9A3-203ENST00000462700 TRAV26-1A0A087WT03 109 aa13.18□□□□□ -0.3
COL9A3-203ENST00000462700 PEX7O00628 323 aa13.18□□□□□ -0.3
COL9A3-203ENST00000462700 NUDT3O95989 172 aa13.18□□□□□ -0.3
COL9A3-203ENST00000462700 RNF212Q495C1 297 aa13.18□□□□□ -0.3
COL9A3-203ENST00000462700 LINC00479Q96M42 142 aa13.18□□□□□ -0.3
COL9A3-203ENST00000462700 ZNF80P51504 273 aaPredicted RBP13.17□□□□□ -0.3
COL9A3-203ENST00000462700 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
COL9A3-203ENST00000462700 DPPA3Q6W0C5 159 aa13.17□□□□□ -0.3
COL9A3-203ENST00000462700 MBD3L1Q8WWY6 194 aa13.17□□□□□ -0.3
COL9A3-203ENST00000462700 HIST1H2BAQ96A08 127 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms