RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 TEX261Q6UWH6 196 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF680Q8NEM1 530 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 C11orf45Q8TAV5 145 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 TMEM263Q8WUH6 116 aaKnown RBP4.63□□□□□ -1.67
SF3B1-206ENST00000462613 KCNS1Q96KK3 526 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 VAX2Q9UIW0 290 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 ZFP30Q9Y2G7 519 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 X6R8D5 127 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 COL7A1Q02388 2944 aa4.63□□□□□ -1.67
SF3B1-206ENST00000462613 TRGV11A0A075B6L2 103 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF705GA8MUZ8 300 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-206ENST00000462613 GCGP01275 180 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 EMP1P54849 157 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 BTN1A1Q13410 526 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 TMEM183BQ1AE95 376 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 C1orf158Q8N1D5 194 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 EIF4E3Q8N5X7 224 aaKnown RBP4.62□□□□□ -1.67
SF3B1-206ENST00000462613 ZFAND2AQ8N6M9 145 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 Q8NAQ8 132 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 MUC7Q8TAX7 377 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 FAM19A4Q96LR4 140 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 SGK494Q96LW2 274 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 EIF5A2Q9GZV4 153 aaKnown RBP4.62□□□□□ -1.67
SF3B1-206ENST00000462613 EDA2RQ9HAV5 297 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 BIN3Q9NQY0 253 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 NAGKQ9UJ70 344 aa4.62□□□□□ -1.67
SF3B1-206ENST00000462613 TIMM8BQ9Y5J9 83 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-206ENST00000462613 IGHV1OR15-1A0A075B7D0 117 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 TRAV34A0A0B4J273 112 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 TRBV6-1A0A0K0K1D8 114 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 SCO2A0A1W2PP80 73 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 NUPR2A6NF83 97 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 RBFOX3A6NFN3 312 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 LYRM9A8MSI8 78 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 FABP5P3A8MUU1 101 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 C3orf84H3BNL1 204 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 DEFB4AO15263 64 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 PFN1P07737 140 aaKnown RBP4.61□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF415Q09FC8 603 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 Q6AWC8 147 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF767PQ75MW2 155 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 Q86TA4 180 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 SDF2L1Q9HCN8 221 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 MED9Q9NWA0 146 aa4.61□□□□□ -1.67
SF3B1-206ENST00000462613 TMEM250H0YL14 139 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF324O75467 553 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-206ENST00000462613 LTAP01374 205 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 RBMY1A1P0DJD3 496 aaKnown RBP4.6□□□□□ -1.67
SF3B1-206ENST00000462613 RBMY1CP0DJD4 496 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 GNG4P50150 75 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 DAD1P61803 113 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 CCL20P78556 96 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 KIR3DS1Q14943 382 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 RBMY1FQ15415 496 aaKnown RBP4.6□□□□□ -1.67
SF3B1-206ENST00000462613 ANXA2RQ3ZCQ2 193 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 TOR2AQ5JU69 321 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 MUC21Q5SSG8 566 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 IBA57Q5T440 356 aaKnown RBP4.6□□□□□ -1.67
SF3B1-206ENST00000462613 FAM162BQ5T6X4 162 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 FAM222AQ5U5X8 452 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 BAGE2Q86Y30 109 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 TMEM183AQ8IXX5 376 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 LYPD6BQ8NI32 183 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 C11orf52Q96A22 123 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 DAZAP1Q96EP5 407 aaKnown RBP4.6□□□□□ -1.67
SF3B1-206ENST00000462613 SMIM12Q96EX1 92 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 C8orf49Q96NF6 230 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 LINC00467Q9BRT7 94 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 KLK5Q9Y337 293 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-206ENST00000462613 KLF12Q9Y4X4 402 aa4.6□□□□□ -1.67
SF3B1-206ENST00000462613 TENM3Q9P273 2699 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 TRAV10A0A0B4J240 114 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 NACAE9PAV3 2078 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 NDUFS6O75380 124 aaKnown RBP4.59□□□□□ -1.67
SF3B1-206ENST00000462613 IGLV2-11P01706 119 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 ORM1P02763 201 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 MGST1P10620 155 aaKnown RBP4.59□□□□□ -1.67
SF3B1-206ENST00000462613 S100A4P26447 101 aaKnown RBP4.59□□□□□ -1.67
SF3B1-206ENST00000462613 RPL35P42766 123 aaKnown RBP4.59□□□□□ -1.67
SF3B1-206ENST00000462613 CEBPGP53567 150 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 TCL1AP56279 114 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 PEA15Q15121 130 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 TDRG1Q3Y452 100 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 ZNF506Q5JVG8 444 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 PRR9Q5T870 116 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 RNASE8Q8TDE3 154 aaKnown RBP4.59□□□□□ -1.67
SF3B1-206ENST00000462613 C2CD4CQ8TF44 421 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 FAM210AQ96ND0 272 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 SPXQ9BT56 116 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 SMDT1Q9H4I9 107 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 DKK2Q9UBU2 259 aa4.59□□□□□ -1.67
SF3B1-206ENST00000462613 STAB2Q8WWQ8 2551 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 TRGV2A0A075B6R0 118 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 XKRY2A2RUG3 117 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 B4DEV8 164 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 DEFB130BP0DP73 79 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 DEFB130AP0DP74 79 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms