RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 HMGB3O15347 200 aaKnown RBP6.37□□□□□ -1.39
DDX39B-216ENST00000462421 CRISP2P16562 243 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 AZU1P20160 251 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 SLAQ13239 276 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 ANXA2RQ3ZCQ2 193 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 RNF212Q495C1 297 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 GOLT1AQ6ZVE7 132 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 SSX7Q7RTT5 188 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 C5orf17Q8NAS9 161 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 Q8TAT8 98 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 TMED6Q8WW62 240 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 ST6GAL2Q96JF0 529 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 KCNS1Q96KK3 526 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 NKX6-2Q9C056 277 aaPredicted RBP6.37□□□□□ -1.39
DDX39B-216ENST00000462421 TREM1Q9NP99 234 aa6.37□□□□□ -1.39
DDX39B-216ENST00000462421 KLLNB2CW77 178 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 TEX46H3BTG2 121 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 GCHFRP30047 84 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 DAZ2Q13117 558 aaKnown RBP6.36□□□□□ -1.39
DDX39B-216ENST00000462421 IBA57Q5T440 356 aaKnown RBP6.36□□□□□ -1.39
DDX39B-216ENST00000462421 RAB24Q969Q5 203 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 VGLL1Q99990 258 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 WFDC1Q9HC57 220 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 SDF2L1Q9HCN8 221 aa6.36□□□□□ -1.39
DDX39B-216ENST00000462421 AGRNO00468 2067 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 A0A0D9SG52 128 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 CTXND1A0A1B0GTU2 59 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 STAG3L2P0CL84 134 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 STAG3L3P0CL85 134 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 UBE2G1P62253 170 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 CD300CQ08708 224 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 MUC21Q5SSG8 566 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 SAPCD1Q5SSQ6 148 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 RPL7L1Q6DKI1 246 aaKnown RBP6.35□□□□□ -1.39
DDX39B-216ENST00000462421 EIF5AL1Q6IS14 154 aaKnown RBP6.35□□□□□ -1.39
DDX39B-216ENST00000462421 LINC00336Q6ZUF6 198 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 CYB561D1Q8N8Q1 229 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 SPXQ9BT56 116 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 GSN-AS1Q9NRJ2 163 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
DDX39B-216ENST00000462421 STARD9Q9P2P6 4700 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 TRAV26-1A0A087WT03 109 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 A0A0J9YY99 117 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 M0R2N4 97 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 PRM2P04554 102 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 S100A4P26447 101 aaKnown RBP6.34□□□□□ -1.39
DDX39B-216ENST00000462421 TCL1AP56279 114 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 KIR3DS1Q14943 382 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 TMEM183BQ1AE95 376 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 LGALS9BQ3B8N2 356 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 SMUG1Q53HV7 270 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 TTC32Q5I0X7 151 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 TMEM183AQ8IXX5 376 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 ZNF471Q9BX82 626 aaPredicted RBP6.34□□□□□ -1.39
DDX39B-216ENST00000462421 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 SH3BGRL3Q9H299 93 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 ICOSQ9Y6W8 199 aa6.34□□□□□ -1.39
DDX39B-216ENST00000462421 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.4
DDX39B-216ENST00000462421 ALMS1Q8TCU4 4167 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 IGLV2-18A0A075B6J9 118 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 MAP1LC3B2A6NCE7 125 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 UMAD1C9J7I0 102 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 PAX4O43316 350 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 SUMO1P63165 101 aaKnown RBP6.33□□□□□ -1.4
DDX39B-216ENST00000462421 ZNF345Q14585 488 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 CST9LP1Q5W188 147 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 Q6AWC8 147 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 PRNTQ86SH4 94 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 ZFAND2AQ8N6M9 145 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 ZNF503Q96F45 646 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 TCEAL7Q9BRU2 100 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 MAP1LC3BQ9GZQ8 125 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 TMPRSS5Q9H3S3 457 aa6.33□□□□□ -1.4
DDX39B-216ENST00000462421 A0A1W2PRE2 83 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 RNF222A6NCQ9 220 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 H3BNG1 76 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 ZNF324O75467 553 aaPredicted RBP6.32□□□□□ -1.4
DDX39B-216ENST00000462421 EIF3GO75821 320 aaKnown RBP eCLIP6.32□□□□□ -1.4
DDX39B-216ENST00000462421 IGHV3-53P01767 116 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 TCRAP04437 139 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 TPT1P13693 172 aaKnown RBP6.32□□□□□ -1.4
DDX39B-216ENST00000462421 UBE2G2P60604 165 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 GNG5P63218 68 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 FLI1Q01543 452 aaPredicted RBP6.32□□□□□ -1.4
DDX39B-216ENST00000462421 Q6ZTI0 123 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 HIST1H2BAQ96A08 127 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 FAM19A4Q96LR4 140 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 MRPL16Q9NX20 251 aaKnown RBP6.32□□□□□ -1.4
DDX39B-216ENST00000462421 EPDR1Q9UM22 224 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 PSG8Q9UQ74 426 aa6.32□□□□□ -1.4
DDX39B-216ENST00000462421 PLAC8L1A1L4L8 177 aa6.31□□□□□ -1.4
DDX39B-216ENST00000462421 C9JCJ5 164 aa6.31□□□□□ -1.4
DDX39B-216ENST00000462421 M0R2P5 195 aa6.31□□□□□ -1.4
DDX39B-216ENST00000462421 BCL2L11O43521 198 aa6.31□□□□□ -1.4
DDX39B-216ENST00000462421 ORM1P02763 201 aa6.31□□□□□ -1.4
DDX39B-216ENST00000462421 SRIP30626 198 aa6.31□□□□□ -1.4
DDX39B-216ENST00000462421 AKR1C3P42330 323 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms