RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 SELENOTP62341 195 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 SERF2P84101 59 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 RPL18AQ02543 176 aaKnown RBP3.44□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF616Q08AN1 781 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 DEFB136Q30KP8 78 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 AKR1C8PQ5T2L2 129 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 SPATA31B1PQ5VZV4 182 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 SPSB3Q6PJ21 355 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF767PQ75MW2 155 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 RPP25LQ8N5L8 163 aaKnown RBP3.44□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF709Q8N972 641 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 KLHL30-AS1Q8NEE0 82 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 OR51G1Q8NGK1 321 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 C4orf3Q8WVX3 66 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 CHCHD10Q8WYQ3 142 aaPredicted RBP3.44□□□□□ -1.86
CSMD3-205ENST00000462254 DUX3Q96PT4 197 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 PBDC1Q9BVG4 233 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 SLC25A22Q9H936 323 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 RPRMQ9NS64 109 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 KLF12Q9Y4X4 402 aa3.44□□□□□ -1.86
CSMD3-205ENST00000462254 AGRNO00468 2067 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
CSMD3-205ENST00000462254 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 UMAD1C9J7I0 102 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 H3BRN7 92 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 NDUFA4O00483 81 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 HMGB3O15347 200 aaKnown RBP3.43□□□□□ -1.86
CSMD3-205ENST00000462254 GGCTO75223 188 aaKnown RBP3.43□□□□□ -1.86
CSMD3-205ENST00000462254 IGLL1P15814 213 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 ORM2P19652 201 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 RAB31Q13636 194 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 ACOT6Q3I5F7 207 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-205ENST00000462254 FAM78BQ5VT40 261 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 EIF5AL1Q6IS14 154 aaKnown RBP3.43□□□□□ -1.86
CSMD3-205ENST00000462254 TOMM20LQ6UXN7 152 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 UNQ9165/PRO28630Q6UXU0 137 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 MIR17HGQ75NE6 70 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 OR11H1Q8NG94 326 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 OR10G4Q8NGN3 311 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 OR10G9Q8NGN4 311 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 FAM213BQ8TBF2 198 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 Q8WTZ3 238 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 KCNIP2Q9NS61 270 aa3.43□□□□□ -1.86
CSMD3-205ENST00000462254 MRPL27Q9P0M9 148 aaKnown RBP3.43□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV3OR16-13A0A075B7E8 117 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV3-49A0A0A0MS15 119 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV3-74A0A0B4J1X5 117 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 TRAV5A0A0B4J249 113 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV3-16A0A0C4DH30 117 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 CTXND1A0A1B0GTU2 59 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 A0A1B0GV50 99 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 MAP1LC3B2A6NCE7 125 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 RBMY1BA6NDE4 496 aaKnown RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 RBMY1EA6NEQ0 496 aaKnown RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 A8MWP6 167 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 LINC01619G3V211 115 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 CRXO43186 299 aaPredicted RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF207O43670 478 aaKnown RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 COX7A2P2O60397 106 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 HSPB1P04792 205 aaKnown RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 FABP1P07148 127 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 OR5AL1P0C617 328 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 RBMY1DP0C7P1 496 aaKnown RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 RBMY1A1P0DJD3 496 aaKnown RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 RAB5CP51148 216 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 FGF8P55075 233 aaPredicted RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 RHOBP62745 196 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 CLLU1Q5K131 121 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 C10orf113Q5VZT2 155 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 LEMD1Q68G75 181 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 LCN15Q6UWW0 184 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 DPPA3Q6W0C5 159 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 LINC00305Q7Z4B0 112 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 GPHB5Q86YW7 130 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 MBD3L1Q8WWY6 194 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 TMEM190Q8WZ59 177 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 FAM167A-AS1Q96KT0 104 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 PFDN5Q99471 154 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 C19orf24Q9BVV8 132 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 SCRT1Q9BWW7 348 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 SLC25A2Q9BXI2 301 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 MRPL32Q9BYC8 188 aaKnown RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 SLC25A39Q9BZJ4 359 aaPredicted RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 MAP1LC3BQ9GZQ8 125 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 FUT9Q9Y231 359 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 HIGD1AQ9Y241 93 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 PYGO1Q9Y3Y4 419 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 SETD2Q9BYW2 2564 aaPredicted RBP3.42□□□□□ -1.86
CSMD3-205ENST00000462254 SORL1Q92673 2214 aa3.42□□□□□ -1.86
CSMD3-205ENST00000462254 JMJD1CQ15652 2540 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 TENM1Q9UKZ4 2725 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV1OR15-1A0A075B7D0 117 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 IGHV3-66A0A0C4DH42 116 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 ZNF98A6NK75 572 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 M0R036 132 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 LGALS9O00182 355 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 HYPMO75409 117 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms