RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 FFAR4Q5NUL3 377 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 SPATA31B1PQ5VZV4 182 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 EIF4E3Q8N5X7 224 aaKnown RBP4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 STPG4Q8N801 248 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 HSD17B11Q8NBQ5 300 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 RXFP4Q8TDU9 374 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 NOL4LQ96MY1 436 aaPredicted RBP4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 MGST2Q99735 147 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 PRELID1Q9Y255 219 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 CBY1Q9Y3M2 126 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 DNAH9Q9NYC9 4486 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 FBN3Q75N90 2809 aa4.22□□□□□ -1.73
THUMPD3-207ENST00000461636 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 A0A1W2PRE2 83 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 OR2T8A6NH00 312 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 I3L521 148 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 K7EQD1 137 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 PPP1R2P9O14990 202 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 YIF1AO95070 293 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 IGKV1-17P01599 117 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 REG1AP05451 166 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 HIST1H1EP10412 219 aaKnown RBP4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 MUC21Q5SSG8 566 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 FAM78BQ5VT40 261 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 CLEC19AQ6UXS0 136 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 LINC00305Q7Z4B0 112 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 OR1N2Q8NGR9 330 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 ISOC2Q96AB3 205 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 SMIM12Q96EX1 92 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 SLC50A1Q9BRV3 221 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 SMIM3Q9BZL3 60 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 BIN3Q9NQY0 253 aa4.21□□□□□ -1.74
THUMPD3-207ENST00000461636 IGKV1D-37A0A075B6S9 117 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 IGKV1OR2-108A0A075B7D4 117 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 PRAC2D3DTV9 90 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 TMEM250H0YL14 139 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 IL4P05112 153 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 SNRPCP09234 159 aaKnown RBP4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 ORM2P19652 201 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 CSN1S1P47710 185 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 HNRNPA3P51991 378 aaKnown RBP4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 TCTEX1D4Q5JR98 221 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 LCN15Q6UWW0 184 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 OR8I2Q8N0Y5 310 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 RPP25LQ8N5L8 163 aaKnown RBP4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 SFT2D1Q8WV19 159 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 HIST1H2BAQ96A08 127 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 C11orf52Q96A22 123 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 SHANK2-AS3Q9BTD1 123 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 MAP1LC3CQ9BXW4 147 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 SLC25A39Q9BZJ4 359 aaPredicted RBP4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 GNB4Q9HAV0 340 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 WFDC1Q9HC57 220 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 RPRMQ9NS64 109 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 MLXQ9UH92 298 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 VAX2Q9UIW0 290 aa4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 PUS1Q9Y606 427 aaKnown RBP eCLIP4.2□□□□□ -1.74
THUMPD3-207ENST00000461636 MEGF8Q7Z7M0 2845 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 MAP1LC3B2A6NCE7 125 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 LINC00862A6NCI5 91 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 ZNF98A6NK75 572 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 KRBOX1C9JBD0 128 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 OR7C2O60412 319 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 NBEAP1P0C6P0 100 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 APELAP0DMC3 54 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 NKX2-5P52952 324 aaPredicted RBP4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 LYZP61626 148 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 SNRPD3P62318 126 aaKnown RBP4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 ZNF90Q03938 601 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 CD300CQ08708 224 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 C10orf99Q6UWK7 81 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 ALKAL2Q6UX46 152 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 TOMM20LQ6UXN7 152 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 C12orf54Q6X4T0 127 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 C3orf56Q8N813 242 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 OR11H1Q8NG94 326 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 FAM213BQ8TBF2 198 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 RSG1Q9BU20 258 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 PAXXQ9BUH6 204 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 MAP1LC3BQ9GZQ8 125 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 VSIRQ9H7M9 311 aa4.19□□□□□ -1.74
THUMPD3-207ENST00000461636 IGHV7-4-1A0A0J9YVY3 117 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 A0A1B0GW15 77 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 RBAKDNA6NC62 111 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 H3BRN7 92 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 ISLRO14498 428 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 NXPH4O95158 308 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 SLC25A5P05141 298 aaKnown RBP4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 NMBP08949 121 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 S100A1P23297 94 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 RPL19P84098 196 aaKnown RBP4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 MEF2BQ02080 365 aaPredicted RBP4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 MIC13Q5XKP0 118 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 KLHL30-AS1Q8NEE0 82 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 EIF5A2Q9GZV4 153 aaKnown RBP4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 RETNQ9HD89 108 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 OTORQ9NRC9 128 aa4.18□□□□□ -1.74
THUMPD3-207ENST00000461636 SMPXQ9UHP9 88 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms