RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 HIST1H1EP10412 219 aaKnown RBP11.98□□□□□ -0.49
TOP3A-202ENST00000461127 CCL20P78556 96 aa11.98□□□□□ -0.49
TOP3A-202ENST00000461127 LYPD6BQ8NI32 183 aa11.98□□□□□ -0.49
TOP3A-202ENST00000461127 BLNKQ8WV28 456 aa11.98□□□□□ -0.49
TOP3A-202ENST00000461127 FXYD5Q96DB9 178 aa11.98□□□□□ -0.49
TOP3A-202ENST00000461127 KRTAP1-5Q9BYS1 174 aa11.98□□□□□ -0.49
TOP3A-202ENST00000461127 GNG13Q9P2W3 67 aa11.98□□□□□ -0.49
TOP3A-202ENST00000461127 J3QL48 77 aa11.97□□□□□ -0.49
TOP3A-202ENST00000461127 MRPS12O15235 138 aaKnown RBP11.97□□□□□ -0.49
TOP3A-202ENST00000461127 SNRPCP09234 159 aaKnown RBP11.97□□□□□ -0.49
TOP3A-202ENST00000461127 NBEAP1P0C6P0 100 aa11.97□□□□□ -0.49
TOP3A-202ENST00000461127 MEOX2P50222 304 aa11.97□□□□□ -0.49
TOP3A-202ENST00000461127 XGP55808 180 aa11.97□□□□□ -0.49
TOP3A-202ENST00000461127 GUK1Q16774 197 aa11.97□□□□□ -0.49
TOP3A-202ENST00000461127 FAT1Q14517 4588 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 CBY3A6NI87 242 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 ZNF705GA8MUZ8 300 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-202ENST00000461127 H3BQ15 152 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 H3BTX0 84 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 ISLRO14498 428 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 SAMD13Q5VXD3 122 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 MANBALQ9NQG1 85 aa11.96□□□□□ -0.49
TOP3A-202ENST00000461127 A0A087X0K7 114 aa11.95□□□□□ -0.5
TOP3A-202ENST00000461127 A0A0J9YX75 114 aa11.95□□□□□ -0.5
TOP3A-202ENST00000461127 F6UB75 175 aa11.95□□□□□ -0.5
TOP3A-202ENST00000461127 TSPOP30536 169 aa11.95□□□□□ -0.5
TOP3A-202ENST00000461127 UBE2G2P60604 165 aa11.95□□□□□ -0.5
TOP3A-202ENST00000461127 CDPF1Q6NVV7 123 aa11.95□□□□□ -0.5
TOP3A-202ENST00000461127 ZNF586Q9NXT0 402 aa11.95□□□□□ -0.5
TOP3A-202ENST00000461127 TRBV19A0A075B6N1 114 aa11.94□□□□□ -0.5
TOP3A-202ENST00000461127 INSP01308 110 aa11.94□□□□□ -0.5
TOP3A-202ENST00000461127 PDE6HQ13956 83 aa11.94□□□□□ -0.5
TOP3A-202ENST00000461127 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
TOP3A-202ENST00000461127 SUN5Q8TC36 379 aa11.94□□□□□ -0.5
TOP3A-202ENST00000461127 RBFOX3A6NFN3 312 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 SOCS3O14543 225 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 PAGE4O60829 102 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 BCL2P10415 239 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 TAGLN2P37802 199 aaKnown RBP11.93□□□□□ -0.5
TOP3A-202ENST00000461127 RANP62826 216 aaKnown RBP11.93□□□□□ -0.5
TOP3A-202ENST00000461127 CST9LP1Q5W188 147 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 C17orf77Q96MU5 243 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 SLC50A1Q9BRV3 221 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
TOP3A-202ENST00000461127 ARL2-SNX15V9GYD0 113 aa11.93□□□□□ -0.5
TOP3A-202ENST00000461127 A0A1W2PRE2 83 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 FAM229AH3BQW9 127 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 ZNF253O75346 499 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 PRM2P04554 102 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 TOR2AQ5JU69 321 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 C16orf92Q96LL3 132 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 FAM210AQ96ND0 272 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 AAMDCQ9H7C9 122 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 VPS13BQ7Z7G8 4022 aa11.92□□□□□ -0.5
TOP3A-202ENST00000461127 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 SLC17A3O00476 420 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 NDUFB4O95168 129 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 ERVFC1-1P60608 527 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 COMMD7Q86VX2 200 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-202ENST00000461127 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 MED9Q9NWA0 146 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
TOP3A-202ENST00000461127 LINC00862A6NCI5 91 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 A8MTW9 85 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 LINC00315P59091 139 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 OR5I1Q13606 314 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 SPINK13Q1W4C9 94 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 ZNF506Q5JVG8 444 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 AMTNQ6UX39 209 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 RXFP4Q8TDU9 374 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 TXNDC17Q9BRA2 123 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-202ENST00000461127 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
TOP3A-202ENST00000461127 RAB19A4D1S5 217 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 PGPA6NDG6 321 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 M0R2Z0 102 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 DUSP14O95147 198 aaKnown RBP11.89□□□□□ -0.51
TOP3A-202ENST00000461127 SMR3BP02814 79 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-202ENST00000461127 SUMO1P63165 101 aaKnown RBP11.89□□□□□ -0.51
TOP3A-202ENST00000461127 MEF2BQ02080 365 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-202ENST00000461127 ICAM4Q14773 271 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 PEA15Q15121 130 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 EXOC3-AS1Q8N2X6 119 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 OR10J6PQ8NGY7 276 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
TOP3A-202ENST00000461127 MRPS16Q9Y3D3 137 aaKnown RBP11.89□□□□□ -0.51
TOP3A-202ENST00000461127 TIMM8BQ9Y5J9 83 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-202ENST00000461127 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
TOP3A-202ENST00000461127 AZU1P20160 251 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
TOP3A-202ENST00000461127 CSN1S1P47710 185 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 IGFL4Q6B9Z1 124 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 Q6ZSN1 163 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 C16orf74Q96GX8 76 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 LINC01587Q99440 93 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms