RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 IGHV1-69DA0A0B4J2H0 117 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 A0A0G2JLM5 398 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 KBTBD11-OT1A0A1B0GTJ5 212 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 TEX48A0A1B0GUV7 120 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 TMEM262E9PQX1 116 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 J3KT08 172 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 J3QLI3 93 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 M0R2Z0 102 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 SDCBPO00560 298 aaPredicted RBP3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 NPFFO15130 113 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 PITX3O75364 302 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 NAPSAO96009 420 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 IGHV1-69P01742 117 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 SPINK8P0C7L1 97 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 PMCHP20382 165 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 PRTN3P24158 256 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 IL3RAP26951 378 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 MEF2CQ06413 473 aaPredicted RBP3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 ARFRP1Q13795 201 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 PMVKQ15126 192 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 MPV17L2Q567V2 206 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 PSMG4Q5JS54 123 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 SLC35E4Q6ICL7 350 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF880Q6PDB4 577 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 LCN15Q6UWW0 184 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 C9orf139Q6ZV77 190 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 HOGA1Q86XE5 327 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 GAPTQ8N292 157 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 TMEM256Q8N2U0 113 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 OR5D13Q8NGL4 314 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 OR9G4Q8NGQ1 327 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 OR10AG1Q8NH19 301 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNRF2Q8NHG8 242 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 MBD3L1Q8WWY6 194 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 IL1F10Q8WWZ1 152 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 ATP5SQ99766 215 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 RARRES2Q99969 163 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 C19orf24Q9BVV8 132 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 MRPL32Q9BYC8 188 aaKnown RBP3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 MAP1LC3AQ9H492 121 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 IDI2-AS1Q9NZ38 188 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 ANXA10Q9UJ72 324 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 ANAPC10Q9UM13 185 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF257Q9Y2Q1 563 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 HILPDAQ9Y5L2 63 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 LINC00312Q9Y6C7 94 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
ATPAF1-203ENST00000460928 CMYA5Q8N3K9 4069 aa3.71□□□□□ -1.81
ATPAF1-203ENST00000460928 PIGBOS1A0A0B4J2F0 54 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 MUC21A0A0G2JKD1 596 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 MUC21A0A140T8X8 626 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 A0A1W2PPM0 123 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 ODF3BA8MYP8 253 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 F5H768 121 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 M0R1W7 72 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 CRXO43186 299 aaPredicted RBP3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 ZNF324O75467 553 aaPredicted RBP3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 SERF1AO75920 110 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 MOSP00540 346 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 KRTDAPP60985 99 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 RPL23P62829 140 aaKnown RBP3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 RPL36AP83881 106 aaKnown RBP3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 KRTAP24-1Q3LI83 254 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 MUC21Q5SSG8 566 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 SPATA31B1PQ5VZV4 182 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 RNASEKQ6P5S7 137 aaKnown RBP3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 Q6ZVH6 145 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 LINC00596Q86U02 117 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 BAGE3Q86Y29 109 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 BAGE2Q86Y30 109 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 ABHD12Q8N2K0 398 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 TEX29Q8N6K0 151 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 KIR3DL3Q8N743 410 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 OR10G9Q8NGN4 311 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 KIR2DL5BQ8NHK3 375 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 TXNDC17Q9BRA2 123 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 CLEC7AQ9BXN2 247 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 SMIM3Q9BZL3 60 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 NRN1Q9NPD7 142 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 SPANXB1Q9NS25 103 aaPredicted RBP3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 GNG12Q9UBI6 72 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 VWFP04275 2813 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 TNCP24821 2201 aa3.71□□□□□ -1.82
ATPAF1-203ENST00000460928 A0A0U1RRA0 63 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 CHEK1O14757 476 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 RS1O15537 224 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 CHST1O43916 411 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 IGKV3-20P01619 116 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 IGLV1-47P01700 117 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 C3orf79P0CE67 100 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 SLC25A6P12236 298 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 GPR183P32249 361 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 UBE2E1P51965 193 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 SRSF9Q13242 221 aaKnown RBP eCLIP3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 KIAA1644Q3SXP7 199 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 RPL39P5Q59GN2 51 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 TRPT1Q86TN4 253 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms