RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ZNF138P52744 262 aa12.54□□□□□ -0.4
NELFCD-201ENST00000460601 DEFB131AP59861 70 aa12.54□□□□□ -0.4
NELFCD-201ENST00000460601 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
NELFCD-201ENST00000460601 C19orf71A6NCJ1 209 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 IGLV1-51P01701 117 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 CXCL1P09341 107 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 RPS10P46783 165 aaKnown RBP12.53□□□□□ -0.4
NELFCD-201ENST00000460601 PRR9Q5T870 116 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 APRG1Q8IVJ8 170 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 TCL1AP56279 114 aa12.53□□□□□ -0.4
NELFCD-201ENST00000460601 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
NELFCD-201ENST00000460601 KNCNA6PVL3 124 aa12.52□□□□□ -0.4
NELFCD-201ENST00000460601 SAPCD1Q5SSQ6 148 aa12.52□□□□□ -0.4
NELFCD-201ENST00000460601 PFN1P07737 140 aaKnown RBP12.52□□□□□ -0.41
NELFCD-201ENST00000460601 MAP6D1Q9H9H5 199 aa12.52□□□□□ -0.41
NELFCD-201ENST00000460601 A0A0J9YX75 114 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 A0A1W2PPQ1 181 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 PPP1R2P9O14990 202 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 SH2D1AO60880 128 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 P01737 135 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 GZMBP10144 247 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 ODF3L2Q3SX64 289 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 C3orf56Q8N813 242 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 OR4B1Q8NGF8 309 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 NDFIP1Q9BT67 221 aa12.51□□□□□ -0.41
NELFCD-201ENST00000460601 NDUFA6P56556 154 aa12.5□□□□□ -0.41
NELFCD-201ENST00000460601 ACTL10Q5JWF8 245 aa12.5□□□□□ -0.41
NELFCD-201ENST00000460601 C14orf144Q96I85 54 aa12.5□□□□□ -0.41
NELFCD-201ENST00000460601 OR4C46A6NHA9 309 aa12.5□□□□□ -0.41
NELFCD-201ENST00000460601 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
NELFCD-201ENST00000460601 ZFAND2AQ8N6M9 145 aa12.5□□□□□ -0.41
NELFCD-201ENST00000460601 DAZAP1Q96EP5 407 aaKnown RBP12.5□□□□□ -0.41
NELFCD-201ENST00000460601 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
NELFCD-201ENST00000460601 FAM162BQ5T6X4 162 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 COX8CQ7Z4L0 72 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 ZNF747Q9BV97 191 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 WFDC10AQ9H1F0 79 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
NELFCD-201ENST00000460601 IL36BQ9NZH7 164 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 TMSB15BA0A087X1C1 80 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 TRAV25A0A0B4J276 109 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 SPINK4O60575 86 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 CD7P09564 240 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 EBLN2Q6P2I7 272 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
NELFCD-201ENST00000460601 M0R2Z0 102 aa12.48□□□□□ -0.41
NELFCD-201ENST00000460601 PKIAP61925 76 aa12.48□□□□□ -0.41
NELFCD-201ENST00000460601 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
NELFCD-201ENST00000460601 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
NELFCD-201ENST00000460601 PPP1R14DQ9NXH3 145 aa12.48□□□□□ -0.41
NELFCD-201ENST00000460601 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 FRMD6-AS1P0C7T7 363 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
NELFCD-201ENST00000460601 FOXI2Q6ZQN5 318 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST3H2BBQ8N257 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 OR10D4PQ8NGN7 298 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 TRAV12-2A0A075B6T6 113 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 C12orf54Q6X4T0 127 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 GTSF1Q8WW33 167 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 NEU1Q99519 415 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
NELFCD-201ENST00000460601 FXYD7P58549 80 aa12.46□□□□□ -0.41
NELFCD-201ENST00000460601 TMEM158Q8WZ71 300 aa12.46□□□□□ -0.41
NELFCD-201ENST00000460601 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.42
NELFCD-201ENST00000460601 TSTD3H0UI37 97 aa12.46□□□□□ -0.42
NELFCD-201ENST00000460601 GPX1P07203 203 aa12.46□□□□□ -0.42
NELFCD-201ENST00000460601 RNASE4P34096 147 aaKnown RBP12.46□□□□□ -0.42
NELFCD-201ENST00000460601 SPINK13Q1W4C9 94 aa12.46□□□□□ -0.42
NELFCD-201ENST00000460601 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.42
NELFCD-201ENST00000460601 RBMY1BA6NDE4 496 aaKnown RBP12.45□□□□□ -0.42
NELFCD-201ENST00000460601 RBMY1EA6NEQ0 496 aaKnown RBP12.45□□□□□ -0.42
NELFCD-201ENST00000460601 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
NELFCD-201ENST00000460601 H3BMM0 161 aa12.45□□□□□ -0.42
NELFCD-201ENST00000460601 RBMY1DP0C7P1 496 aaKnown RBP12.45□□□□□ -0.42
NELFCD-201ENST00000460601 IGLL1P15814 213 aa12.45□□□□□ -0.42
NELFCD-201ENST00000460601 DDTP30046 118 aa12.45□□□□□ -0.42
NELFCD-201ENST00000460601 CDPF1Q6NVV7 123 aa12.45□□□□□ -0.42
NELFCD-201ENST00000460601 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
NELFCD-201ENST00000460601 LENEPQ9Y5L5 61 aa12.45□□□□□ -0.42
NELFCD-201ENST00000460601 FABP5P3A8MUU1 101 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 ORM1P02763 201 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 AMTNQ6UX39 209 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms