RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 RNASE4P34096 147 aaKnown RBP16.21■□□□□ 0.19
C9orf3-209ENST00000460573 ATP5G3P48201 142 aa16.21■□□□□ 0.19
C9orf3-209ENST00000460573 TAS2R60P59551 318 aa16.21■□□□□ 0.19
C9orf3-209ENST00000460573 FLI1Q01543 452 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-209ENST00000460573 RBMY1FQ15415 496 aaKnown RBP16.21■□□□□ 0.19
C9orf3-209ENST00000460573 PSG8Q9UQ74 426 aa16.21■□□□□ 0.19
C9orf3-209ENST00000460573 TRAV12-3A0A0B4J271 114 aa16.2■□□□□ 0.18
C9orf3-209ENST00000460573 C11orf94C9JXX5 98 aa16.2■□□□□ 0.18
C9orf3-209ENST00000460573 IGLV2-11P01706 119 aa16.2■□□□□ 0.18
C9orf3-209ENST00000460573 TAGLN2P37802 199 aaKnown RBP16.2■□□□□ 0.18
C9orf3-209ENST00000460573 LYPD6BQ8NI32 183 aa16.2■□□□□ 0.18
C9orf3-209ENST00000460573 SAPCD1Q5SSQ6 148 aa16.19■□□□□ 0.18
C9orf3-209ENST00000460573 PYGO2Q9BRQ0 406 aa16.19■□□□□ 0.18
C9orf3-209ENST00000460573 TREM1Q9NP99 234 aa16.19■□□□□ 0.18
C9orf3-209ENST00000460573 ZNF324O75467 553 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-209ENST00000460573 BTN1A1Q13410 526 aa16.18■□□□□ 0.18
C9orf3-209ENST00000460573 FMC1Q96HJ9 113 aa16.18■□□□□ 0.18
C9orf3-209ENST00000460573 SGK494Q96LW2 274 aa16.18■□□□□ 0.18
C9orf3-209ENST00000460573 S100A9P06702 114 aaKnown RBP16.17■□□□□ 0.18
C9orf3-209ENST00000460573 Q6AWC8 147 aa16.17■□□□□ 0.18
C9orf3-209ENST00000460573 ZNF493Q6ZR52 646 aa16.17■□□□□ 0.18
C9orf3-209ENST00000460573 PRNTQ86SH4 94 aa16.17■□□□□ 0.18
C9orf3-209ENST00000460573 PCNPQ8WW12 178 aaKnown RBP16.17■□□□□ 0.18
C9orf3-209ENST00000460573 LINC00479Q96M42 142 aa16.17■□□□□ 0.18
C9orf3-209ENST00000460573 LINC00467Q9BRT7 94 aa16.17■□□□□ 0.18
C9orf3-209ENST00000460573 KLF12Q9Y4X4 402 aa16.17■□□□□ 0.18
C9orf3-209ENST00000460573 RYR3Q15413 4870 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 TRBV6-1A0A0K0K1D8 114 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 LCE6AA0A183 80 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 LOC102723971A0A1B0GUV8 181 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 RAB19A4D1S5 217 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 ZNF705GA8MUZ8 300 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-209ENST00000460573 DEFB4AO15263 64 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 AKR1C3P42330 323 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 UBE2G1P62253 170 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 PRR9Q5T870 116 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 SLC7A5P1Q8MH63 180 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 EIF4E3Q8N5X7 224 aaKnown RBP16.16■□□□□ 0.18
C9orf3-209ENST00000460573 TVP23CQ96ET8 276 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 DNAH7Q8WXX0 4024 aa16.16■□□□□ 0.18
C9orf3-209ENST00000460573 TRAV34A0A0B4J273 112 aa16.15■□□□□ 0.18
C9orf3-209ENST00000460573 BCL2P10415 239 aa16.15■□□□□ 0.18
C9orf3-209ENST00000460573 MEF2BQ02080 365 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-209ENST00000460573 COMMD7Q86VX2 200 aa16.15■□□□□ 0.18
C9orf3-209ENST00000460573 C16orf74Q96GX8 76 aa16.15■□□□□ 0.18
C9orf3-209ENST00000460573 VAX2Q9UIW0 290 aa16.15■□□□□ 0.18
C9orf3-209ENST00000460573 ZFP30Q9Y2G7 519 aa16.15■□□□□ 0.18
C9orf3-209ENST00000460573 PDE6DO43924 150 aa16.14■□□□□ 0.17
C9orf3-209ENST00000460573 HTN1P15515 57 aa16.14■□□□□ 0.17
C9orf3-209ENST00000460573 TMEM183BQ1AE95 376 aa16.14■□□□□ 0.17
C9orf3-209ENST00000460573 C2CD4CQ8TF44 421 aa16.14■□□□□ 0.17
C9orf3-209ENST00000460573 TRAV21A0A0B4J279 112 aa16.13■□□□□ 0.17
C9orf3-209ENST00000460573 TEX48A0A1B0GUV7 120 aa16.13■□□□□ 0.17
C9orf3-209ENST00000460573 SMUG1Q53HV7 270 aa16.13■□□□□ 0.17
C9orf3-209ENST00000460573 Q86TA4 180 aa16.13■□□□□ 0.17
C9orf3-209ENST00000460573 C11orf45Q8TAV5 145 aa16.13■□□□□ 0.17
C9orf3-209ENST00000460573 TMEM263Q8WUH6 116 aaKnown RBP16.13■□□□□ 0.17
C9orf3-209ENST00000460573 SCO2A0A1W2PP80 73 aa16.12■□□□□ 0.17
C9orf3-209ENST00000460573 S100A1P23297 94 aa16.12■□□□□ 0.17
C9orf3-209ENST00000460573 ANXA2RQ3ZCQ2 193 aa16.12■□□□□ 0.17
C9orf3-209ENST00000460573 UQCC3Q6UW78 93 aa16.12■□□□□ 0.17
C9orf3-209ENST00000460573 C11orf52Q96A22 123 aa16.12■□□□□ 0.17
C9orf3-209ENST00000460573 IGHV1OR15-1A0A075B7D0 117 aa16.11■□□□□ 0.17
C9orf3-209ENST00000460573 CXorf65A6NEN9 183 aa16.11■□□□□ 0.17
C9orf3-209ENST00000460573 ATP6V1G1O75348 118 aa16.11■□□□□ 0.17
C9orf3-209ENST00000460573 SPART-AS1P0CW21 52 aa16.11■□□□□ 0.17
C9orf3-209ENST00000460573 AZU1P20160 251 aa16.11■□□□□ 0.17
C9orf3-209ENST00000460573 RNASE8Q8TDE3 154 aaKnown RBP16.11■□□□□ 0.17
C9orf3-209ENST00000460573 C8orf49Q96NF6 230 aa16.11■□□□□ 0.17
C9orf3-209ENST00000460573 RBFOX3A6NFN3 312 aa16.1■□□□□ 0.17
C9orf3-209ENST00000460573 GCGP01275 180 aa16.1■□□□□ 0.17
C9orf3-209ENST00000460573 LTAP01374 205 aa16.1■□□□□ 0.17
C9orf3-209ENST00000460573 PRM2P04554 102 aa16.1■□□□□ 0.17
C9orf3-209ENST00000460573 EMP1P54849 157 aa16.1■□□□□ 0.17
C9orf3-209ENST00000460573 COX8CQ7Z4L0 72 aa16.1■□□□□ 0.17
C9orf3-209ENST00000460573 CBY3A6NI87 242 aa16.09■□□□□ 0.17
C9orf3-209ENST00000460573 PFN1P07737 140 aaKnown RBP16.09■□□□□ 0.17
C9orf3-209ENST00000460573 FAM159AQ6UWV7 190 aa16.09■□□□□ 0.17
C9orf3-209ENST00000460573 SMDT1Q9H4I9 107 aa16.09■□□□□ 0.17
C9orf3-209ENST00000460573 LYRM9A8MSI8 78 aa16.08■□□□□ 0.16
C9orf3-209ENST00000460573 Q6ZQT7 251 aa16.08■□□□□ 0.16
C9orf3-209ENST00000460573 DKK2Q9UBU2 259 aa16.08■□□□□ 0.16
C9orf3-209ENST00000460573 TIMM8BQ9Y5J9 83 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-209ENST00000460573 PLAC8L1A1L4L8 177 aa16.07■□□□□ 0.16
C9orf3-209ENST00000460573 TDRG1Q3Y452 100 aa16.07■□□□□ 0.16
C9orf3-209ENST00000460573 ZNF506Q5JVG8 444 aa16.07■□□□□ 0.16
C9orf3-209ENST00000460573 FAM222AQ5U5X8 452 aa16.07■□□□□ 0.16
C9orf3-209ENST00000460573 TMEM183AQ8IXX5 376 aa16.07■□□□□ 0.16
C9orf3-209ENST00000460573 KCNS1Q96KK3 526 aa16.07■□□□□ 0.16
C9orf3-209ENST00000460573 TENM2Q9NT68 2774 aa16.06■□□□□ 0.16
C9orf3-209ENST00000460573 SNURFLB1AK76 121 aa16.06■□□□□ 0.16
C9orf3-209ENST00000460573 NDUFS6O75380 124 aaKnown RBP16.06■□□□□ 0.16
C9orf3-209ENST00000460573 RPL35P42766 123 aaKnown RBP16.06■□□□□ 0.16
C9orf3-209ENST00000460573 ZNF80P51504 273 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-209ENST00000460573 IBA57Q5T440 356 aaKnown RBP16.06■□□□□ 0.16
C9orf3-209ENST00000460573 FAM210AQ96ND0 272 aa16.06■□□□□ 0.16
C9orf3-209ENST00000460573 CELA1Q9UNI1 258 aa16.06■□□□□ 0.16
C9orf3-209ENST00000460573 FABP5P3A8MUU1 101 aa16.05■□□□□ 0.16
C9orf3-209ENST00000460573 NANOS2P60321 138 aaKnown RBP16.05■□□□□ 0.16
C9orf3-209ENST00000460573 PEA15Q15121 130 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms