RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
YIPF3-205ENST00000460547 LOC102724200A0A096LPH7 203 aaPredicted RBP12.86□□□□□ -0.35
YIPF3-205ENST00000460547 SOCS3O14543 225 aa12.86□□□□□ -0.35
YIPF3-205ENST00000460547 ZNF324O75467 553 aaPredicted RBP12.86□□□□□ -0.35
YIPF3-205ENST00000460547 CTRLP40313 264 aa12.86□□□□□ -0.35
YIPF3-205ENST00000460547 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
YIPF3-205ENST00000460547 LCNL1Q6ZST4 164 aa12.86□□□□□ -0.35
YIPF3-205ENST00000460547 Q6ZWC4 215 aa12.86□□□□□ -0.35
YIPF3-205ENST00000460547 BORCS7Q96B45 105 aa12.86□□□□□ -0.35
YIPF3-205ENST00000460547 DAZ1Q9NQZ3 744 aaKnown RBP12.86□□□□□ -0.35
YIPF3-205ENST00000460547 IGHV7-4-1A0A0J9YVY3 117 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 DNAJC9-AS1A6NH13 148 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 ZNF138P52744 262 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 ERCC8Q13216 396 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 MYOZ3Q8TDC0 251 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 C16orf92Q96LL3 132 aa12.85□□□□□ -0.35
YIPF3-205ENST00000460547 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
YIPF3-205ENST00000460547 TMEM78Q5T7P6 136 aa12.84□□□□□ -0.35
YIPF3-205ENST00000460547 ZNF493Q6ZR52 646 aa12.84□□□□□ -0.35
YIPF3-205ENST00000460547 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
YIPF3-205ENST00000460547 ZNF702PQ9H963 129 aa12.84□□□□□ -0.35
YIPF3-205ENST00000460547 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
YIPF3-205ENST00000460547 LINC00587B1AMM8 73 aa12.83□□□□□ -0.35
YIPF3-205ENST00000460547 IGLC6P0CF74 106 aa12.83□□□□□ -0.35
YIPF3-205ENST00000460547 PKIAP61925 76 aa12.83□□□□□ -0.35
YIPF3-205ENST00000460547 FOXE3Q13461 319 aa12.83□□□□□ -0.35
YIPF3-205ENST00000460547 LINC01559Q495D7 138 aa12.83□□□□□ -0.35
YIPF3-205ENST00000460547 HOXA3O43365 443 aaPredicted RBP12.83□□□□□ -0.36
YIPF3-205ENST00000460547 ELANEP08246 267 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 AMTP48728 403 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 HIST1H1AQ02539 215 aaPredicted RBP12.83□□□□□ -0.36
YIPF3-205ENST00000460547 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 RNF152Q8N8N0 203 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 NRN1Q9NPD7 142 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 SMPXQ9UHP9 88 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 NAGKQ9UJ70 344 aa12.83□□□□□ -0.36
YIPF3-205ENST00000460547 LYZL1Q6UWQ5 148 aa12.82□□□□□ -0.36
YIPF3-205ENST00000460547 Q8N2B8 174 aa12.82□□□□□ -0.36
YIPF3-205ENST00000460547 RHPN1-AS1Q9BWJ2 59 aa12.82□□□□□ -0.36
YIPF3-205ENST00000460547 RNASE1P07998 156 aaKnown RBP12.81□□□□□ -0.36
YIPF3-205ENST00000460547 SAMD13Q5VXD3 122 aa12.81□□□□□ -0.36
YIPF3-205ENST00000460547 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
YIPF3-205ENST00000460547 C20orf173Q96LM9 149 aa12.81□□□□□ -0.36
YIPF3-205ENST00000460547 CNFNQ9BYD5 112 aa12.81□□□□□ -0.36
YIPF3-205ENST00000460547 UFC1Q9Y3C8 167 aa12.81□□□□□ -0.36
YIPF3-205ENST00000460547 TSTD3H0UI37 97 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 OVOL1O14753 267 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 PMCHP20382 165 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 ZNF575Q86XF7 245 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 ZNF738Q8NE65 137 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 TMSB15BA0A087X1C1 80 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 SCGB1D1O95968 90 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 NIT1Q86X76 327 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
YIPF3-205ENST00000460547 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
YIPF3-205ENST00000460547 DNHD1Q96M86 4753 aa12.79□□□□□ -0.36
YIPF3-205ENST00000460547 HSBP1O75506 76 aa12.79□□□□□ -0.36
YIPF3-205ENST00000460547 LGALS1P09382 135 aaKnown RBP12.79□□□□□ -0.36
YIPF3-205ENST00000460547 C10orf99Q6UWK7 81 aa12.79□□□□□ -0.36
YIPF3-205ENST00000460547 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
YIPF3-205ENST00000460547 TPPP3Q9BW30 176 aa12.79□□□□□ -0.36
YIPF3-205ENST00000460547 ORM1P02763 201 aa12.78□□□□□ -0.36
YIPF3-205ENST00000460547 RPLP1P05386 114 aaKnown RBP12.78□□□□□ -0.36
YIPF3-205ENST00000460547 REC114Q7Z4M0 266 aa12.78□□□□□ -0.36
YIPF3-205ENST00000460547 URB1-AS1Q96HZ7 61 aa12.78□□□□□ -0.36
YIPF3-205ENST00000460547 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.36
YIPF3-205ENST00000460547 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.36
YIPF3-205ENST00000460547 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.36
YIPF3-205ENST00000460547 C3orf56Q8N813 242 aa12.77□□□□□ -0.36
YIPF3-205ENST00000460547 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.36
YIPF3-205ENST00000460547 UBE2E2Q96LR5 201 aa12.77□□□□□ -0.36
YIPF3-205ENST00000460547 FAM104BQ5XKR9 115 aa12.77□□□□□ -0.37
YIPF3-205ENST00000460547 TEX43Q6ZNM6 134 aa12.77□□□□□ -0.37
YIPF3-205ENST00000460547 RNF114Q9Y508 228 aa12.77□□□□□ -0.37
YIPF3-205ENST00000460547 U3KQK5 164 aa12.77□□□□□ -0.37
YIPF3-205ENST00000460547 TMEM213A2RRL7 107 aa12.76□□□□□ -0.37
YIPF3-205ENST00000460547 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
YIPF3-205ENST00000460547 LGALS9O00182 355 aa12.76□□□□□ -0.37
YIPF3-205ENST00000460547 PRR31Q5SQ13 230 aa12.76□□□□□ -0.37
YIPF3-205ENST00000460547 IGKV3D-20A0A0C4DH25 116 aa12.75□□□□□ -0.37
YIPF3-205ENST00000460547 CD33P20138 364 aa12.75□□□□□ -0.37
YIPF3-205ENST00000460547 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
YIPF3-205ENST00000460547 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
YIPF3-205ENST00000460547 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
YIPF3-205ENST00000460547 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 RAB4AP20338 218 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 NTF3P20783 257 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 APRG1Q8IVJ8 170 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 Q8N976 141 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 STAB1Q9NY15 2570 aa12.74□□□□□ -0.37
YIPF3-205ENST00000460547 M0R2Z0 102 aa12.73□□□□□ -0.37
YIPF3-205ENST00000460547 DDTP30046 118 aa12.73□□□□□ -0.37
YIPF3-205ENST00000460547 KRTDAPP60985 99 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms