RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 KIR2DL5BQ8NHK3 375 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 SLC35B3Q9H1N7 401 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 TP53TG1Q9Y2A0 90 aa11.34□□□□□ -0.59
SDF4-204ENST00000459994 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
SDF4-204ENST00000459994 CRISP2P16562 243 aa11.33□□□□□ -0.6
SDF4-204ENST00000459994 TSPOP30536 169 aa11.33□□□□□ -0.6
SDF4-204ENST00000459994 RPL35P42766 123 aaKnown RBP11.33□□□□□ -0.6
SDF4-204ENST00000459994 SAPCD1Q5SSQ6 148 aa11.33□□□□□ -0.6
SDF4-204ENST00000459994 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
SDF4-204ENST00000459994 ZFP30Q9Y2G7 519 aa11.33□□□□□ -0.6
SDF4-204ENST00000459994 UBE2CO00762 179 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 AMBPP02760 352 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 LEPP41159 167 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 NUTF2P61970 127 aaKnown RBP11.32□□□□□ -0.6
SDF4-204ENST00000459994 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 Q86TA4 180 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 Q8TAT8 98 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 NDFIP1Q9BT67 221 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
SDF4-204ENST00000459994 LTAP01374 205 aa11.31□□□□□ -0.6
SDF4-204ENST00000459994 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
SDF4-204ENST00000459994 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
SDF4-204ENST00000459994 PARLQ9H300 379 aa11.31□□□□□ -0.6
SDF4-204ENST00000459994 CXorf65A6NEN9 183 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 C9JCJ5 164 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 CDKN1BP46527 198 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 FAM74A3Q4VXF1 159 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 COX8CQ7Z4L0 72 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 BAGE2Q86Y30 109 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 ZFAND2AQ8N6M9 145 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
SDF4-204ENST00000459994 KLLNB2CW77 178 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 GIG44P09565 113 aaPredicted RBP11.29□□□□□ -0.6
SDF4-204ENST00000459994 CEBPGP53567 150 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 CENPWQ5EE01 88 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 TMEM183AQ8IXX5 376 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 SMIM7Q9BQ49 75 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
SDF4-204ENST00000459994 KMT2AQ03164 3969 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 ZNF727A8MUV8 499 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 M0R2Z0 102 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 DEFB4AO15263 64 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 CRXO43186 299 aaPredicted RBP11.28□□□□□ -0.6
SDF4-204ENST00000459994 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
SDF4-204ENST00000459994 GNG4P50150 75 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 ZNF674Q2M3X9 581 aa11.28□□□□□ -0.6
SDF4-204ENST00000459994 TMEM218A2RU14 115 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 GPX1P07203 203 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 SFTA3P0C7M3 94 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 FXYD7P58549 80 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 SMUG1Q53HV7 270 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 LINC00476Q8WZB0 136 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 C8orf49Q96NF6 230 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 LY96Q9Y6Y9 160 aa11.27□□□□□ -0.61
SDF4-204ENST00000459994 C7orf71A4D174 169 aa11.26□□□□□ -0.61
SDF4-204ENST00000459994 IGLV2-8P01709 118 aa11.26□□□□□ -0.61
SDF4-204ENST00000459994 GFI1BQ5VTD9 330 aa11.26□□□□□ -0.61
SDF4-204ENST00000459994 CEMP1Q6PRD7 247 aaPredicted RBP11.26□□□□□ -0.61
SDF4-204ENST00000459994 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
SDF4-204ENST00000459994 C20orf144Q9BQM9 153 aa11.26□□□□□ -0.61
SDF4-204ENST00000459994 XCL2Q9UBD3 114 aa11.26□□□□□ -0.61
SDF4-204ENST00000459994 BIRC6Q9NR09 4857 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 INSP01308 110 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
SDF4-204ENST00000459994 NANOS2P60321 138 aaKnown RBP11.25□□□□□ -0.61
SDF4-204ENST00000459994 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 PRR9Q5T870 116 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 Q6AWC8 147 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 CSNK1G2-AS1Q8NCQ2 148 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 ZC2HC1AQ96GY0 325 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 BIN3Q9NQY0 253 aa11.25□□□□□ -0.61
SDF4-204ENST00000459994 TRAV12-2A0A075B6T6 113 aa11.24□□□□□ -0.61
SDF4-204ENST00000459994 J3KRW8 73 aa11.24□□□□□ -0.61
SDF4-204ENST00000459994 GCGP01275 180 aa11.24□□□□□ -0.61
SDF4-204ENST00000459994 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
SDF4-204ENST00000459994 NHLRC2Q8NBF2 726 aa11.24□□□□□ -0.61
SDF4-204ENST00000459994 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
SDF4-204ENST00000459994 NUPR2A6NF83 97 aa11.23□□□□□ -0.61
SDF4-204ENST00000459994 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
SDF4-204ENST00000459994 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
SDF4-204ENST00000459994 LY6G6CO95867 125 aa11.23□□□□□ -0.61
SDF4-204ENST00000459994 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
SDF4-204ENST00000459994 ZNF80P51504 273 aaPredicted RBP11.23□□□□□ -0.61
SDF4-204ENST00000459994 SLC7A5P1Q8MH63 180 aa11.23□□□□□ -0.61
SDF4-204ENST00000459994 PHLDA1Q8WV24 401 aaPredicted RBP11.23□□□□□ -0.61
SDF4-204ENST00000459994 SEC11CQ9BY50 192 aa11.23□□□□□ -0.61
SDF4-204ENST00000459994 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
SDF4-204ENST00000459994 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 TRAV21A0A0B4J279 112 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 FABP5P3A8MUU1 101 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms