RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PSMG3Q9BT73 122 aaPredicted RBP6.97□□□□□ -1.29
HDLBP-228ENST00000459788 Q9H3A6 140 aa6.97□□□□□ -1.29
HDLBP-228ENST00000459788 LINC00588Q9Y4M8 146 aa6.97□□□□□ -1.29
HDLBP-228ENST00000459788 KLF12Q9Y4X4 402 aa6.97□□□□□ -1.29
HDLBP-228ENST00000459788 TRGV2A0A075B6R0 118 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 IGKV2-40A0A087WW87 121 aaPredicted RBP6.96□□□□□ -1.3
HDLBP-228ENST00000459788 J3KRW8 73 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 IGKV2D-40P01614 121 aaPredicted RBP6.96□□□□□ -1.3
HDLBP-228ENST00000459788 MBP02144 154 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 HOXA5P20719 270 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 RANP62826 216 aaKnown RBP6.96□□□□□ -1.3
HDLBP-228ENST00000459788 SERF2P84101 59 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 ZNF415Q09FC8 603 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 TDRG1Q3Y452 100 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 SSX7Q7RTT5 188 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 C6orf223Q8N319 242 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 AQP10Q96PS8 301 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 ARPC5LQ9BPX5 153 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 SPXQ9BT56 116 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 GSN-AS1Q9NRJ2 163 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 MRPS16Q9Y3D3 137 aaKnown RBP6.96□□□□□ -1.3
HDLBP-228ENST00000459788 DNAH11Q96DT5 4516 aa6.96□□□□□ -1.3
HDLBP-228ENST00000459788 TRGV11A0A075B6L2 103 aa6.95□□□□□ -1.3
HDLBP-228ENST00000459788 FBLL1A6NHQ2 334 aaKnown RBP6.95□□□□□ -1.3
HDLBP-228ENST00000459788 PRB4P10163 310 aaPredicted RBP6.95□□□□□ -1.3
HDLBP-228ENST00000459788 IQCF2Q8IXL9 164 aa6.95□□□□□ -1.3
HDLBP-228ENST00000459788 CMTM2Q8TAZ6 248 aa6.95□□□□□ -1.3
HDLBP-228ENST00000459788 TMPRSS5Q9H3S3 457 aa6.95□□□□□ -1.3
HDLBP-228ENST00000459788 Q9H8V8 135 aa6.95□□□□□ -1.3
HDLBP-228ENST00000459788 ALG5Q9Y673 324 aa6.95□□□□□ -1.3
HDLBP-228ENST00000459788 TRGV1A0A0A0MS02 117 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 K7EP13 123 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 PRR9Q5T870 116 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 SUN5Q8TC36 379 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 RASL10AQ92737 203 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 SMIM3Q9BZL3 60 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 MED28Q9H204 178 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 WFDC1Q9HC57 220 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 PRO0255Q9UI72 69 aa6.94□□□□□ -1.3
HDLBP-228ENST00000459788 PGPA6NDG6 321 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 GIPP09681 153 aaPredicted RBP6.93□□□□□ -1.3
HDLBP-228ENST00000459788 STAG3L2P0CL84 134 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 STAG3L3P0CL85 134 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 ESRGQ1W209 222 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 FAM159AQ6UWV7 190 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 OR10G4Q8NGN3 311 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 OR10G9Q8NGN4 311 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 OR10G7Q8NGN6 311 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 VSIG2Q96IQ7 327 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 KCNS1Q96KK3 526 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 TNFSF18Q9UNG2 199 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 BOLA1Q9Y3E2 137 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 ICOSQ9Y6W8 199 aa6.93□□□□□ -1.3
HDLBP-228ENST00000459788 A0A096LPF7 62 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 TRAV21A0A0B4J279 112 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 A0A0J9YY99 117 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 K7EQM0 130 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 CIDEAO60543 219 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 CDC34P49427 236 aaPredicted RBP6.92□□□□□ -1.3
HDLBP-228ENST00000459788 RAB2AP61019 212 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 MRPL23Q16540 153 aaKnown RBP6.92□□□□□ -1.3
HDLBP-228ENST00000459788 C5orf17Q8NAS9 161 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 Q8TAT8 98 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 TMEM167BQ9NRX6 74 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
HDLBP-228ENST00000459788 DYNC1H1Q14204 4646 aaKnown RBP6.92□□□□□ -1.3
HDLBP-228ENST00000459788 PAX4O43316 350 aa6.91□□□□□ -1.3
HDLBP-228ENST00000459788 ORM1P02763 201 aa6.91□□□□□ -1.3
HDLBP-228ENST00000459788 CRYBA4P53673 196 aa6.91□□□□□ -1.3
HDLBP-228ENST00000459788 SH2D6Q7Z4S9 175 aa6.91□□□□□ -1.3
HDLBP-228ENST00000459788 INO80EQ8NBZ0 244 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-228ENST00000459788 NDFIP1Q9BT67 221 aa6.91□□□□□ -1.3
HDLBP-228ENST00000459788 HHLA3Q9XRX5 114 aa6.91□□□□□ -1.3
HDLBP-228ENST00000459788 BORCS7-ASMTA0A0B4J1R7 106 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 TRAV4A0A0B4J268 109 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 A0A1W2PRE2 83 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 M0R2P5 195 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 CXorf1O96002 111 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 ARL14EPLP0DKL9 152 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 ATP6V0CP27449 155 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 FHL2Q14192 279 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 RAB24Q969Q5 203 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 PTH2Q96A98 100 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 HYLS1Q96M11 299 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 NKX6-2Q9C056 277 aaPredicted RBP6.9□□□□□ -1.3
HDLBP-228ENST00000459788 ACTR3CQ9C0K3 210 aaPredicted RBP6.9□□□□□ -1.3
HDLBP-228ENST00000459788 TREM1Q9NP99 234 aa6.9□□□□□ -1.3
HDLBP-228ENST00000459788 TAAR5O14804 337 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 SIVA1O15304 175 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 TCRAP04437 139 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 GCHFRP30047 84 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 TMEM183BQ1AE95 376 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 NEGR1Q7Z3B1 354 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 TMEM183AQ8IXX5 376 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 TMEM75Q8N9X5 138 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 HSD17B11Q8NBQ5 300 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 SDF2L1Q9HCN8 221 aa6.89□□□□□ -1.31
HDLBP-228ENST00000459788 MRPL16Q9NX20 251 aaKnown RBP6.89□□□□□ -1.31
HDLBP-228ENST00000459788 MDFICQ9P1T7 246 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms