RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 FAM213BQ8TBF2 198 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 MYOZ3Q8TDC0 251 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 GNPNAT1Q96EK6 184 aaPredicted RBP7.91□□□□□ -1.14
USP39-210ENST00000459775 VAX2Q9UIW0 290 aa7.91□□□□□ -1.14
USP39-210ENST00000459775 IGHV3OR16-13A0A075B7E8 117 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 TRBV7-1A0A0A6YYK4 115 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 IGHV3-74A0A0B4J1X5 117 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 TRAV5A0A0B4J249 113 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 EVI2AP22794 236 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 SRIP30626 198 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 UNQ9165/PRO28630Q6UXU0 137 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 C8orf86Q6ZUL3 223 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 FAM19A1Q7Z5A9 133 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 OR1B1Q8NGR6 318 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 MRPL53Q96EL3 112 aaKnown RBP7.9□□□□□ -1.14
USP39-210ENST00000459775 USMG5Q96IX5 58 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 TRGV9Q99603 122 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 ANAPC13Q9BS18 74 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 SLC25A22Q9H936 323 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 ZNF586Q9NXT0 402 aa7.9□□□□□ -1.14
USP39-210ENST00000459775 IGHV4OR15-8A0A075B7B6 117 aa7.9□□□□□ -1.15
USP39-210ENST00000459775 A0A087WW49 117 aa7.9□□□□□ -1.15
USP39-210ENST00000459775 IGHV3-66A0A0C4DH42 116 aa7.9□□□□□ -1.15
USP39-210ENST00000459775 MPDU1O75352 247 aa7.9□□□□□ -1.15
USP39-210ENST00000459775 IL4P05112 153 aa7.9□□□□□ -1.15
USP39-210ENST00000459775 OR10G7Q8NGN6 311 aa7.9□□□□□ -1.15
USP39-210ENST00000459775 DERL1Q9BUN8 251 aa7.9□□□□□ -1.15
USP39-210ENST00000459775 C17orf112F2Z3M2 114 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 J3QR89 54 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 M0R2Z0 102 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 GCSHP23434 173 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 MIR17HGQ75NE6 70 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 KLHL30-AS1Q8NEE0 82 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 TP53TG1Q9Y2A0 90 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 VWFP04275 2813 aa7.89□□□□□ -1.15
USP39-210ENST00000459775 J3KT08 172 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 APOHP02749 345 aaPredicted RBP7.88□□□□□ -1.15
USP39-210ENST00000459775 CCL20P78556 96 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 NSUN5P1Q3KNT7 163 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 LCN15Q6UWW0 184 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 Q6ZRG5 221 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 PHYHIPLQ96FC7 376 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 UBE2E2Q96LR5 201 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 SGK494Q96LW2 274 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 RETNQ9HD89 108 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 TIMM9Q9Y5J7 89 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 LGALS1P09382 135 aaKnown RBP7.88□□□□□ -1.15
USP39-210ENST00000459775 SERF2P84101 59 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 COA6Q5JTJ3 125 aaKnown RBP7.88□□□□□ -1.15
USP39-210ENST00000459775 SERTAD4-AS1Q5TG53 156 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 FAM24BQ8N5W8 94 aa7.88□□□□□ -1.15
USP39-210ENST00000459775 ADARB2-AS1A8MUL3 147 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BKO60814 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HSPB1P04792 205 aaKnown RBP7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BJP06899 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 PRB4P10163 310 aaPredicted RBP7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BOP23527 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BBP33778 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 SLURP1P55000 103 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BDP58876 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 YPEL3P61236 119 aaPredicted RBP7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BCP62807 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 FOXL1Q12952 345 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST2H2BEQ16778 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.87□□□□□ -1.15
USP39-210ENST00000459775 GATAD1Q8WUU5 269 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BHQ93079 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 YPEL4Q96NS1 127 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BNQ99877 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 HIST1H2BMQ99879 126 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 SCRT1Q9BWW7 348 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 MS4A6AQ9H2W1 248 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 WI2-2373I1.2A0A1W2PRP0 233 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 COX7A2P2O60397 106 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 RPL7P18124 248 aaKnown RBP7.87□□□□□ -1.15
USP39-210ENST00000459775 FOXI2Q6ZQN5 318 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 LINC00305Q7Z4B0 112 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 WNK1Q9H4A3 2382 aa7.87□□□□□ -1.15
USP39-210ENST00000459775 H3BTX0 84 aa7.86□□□□□ -1.15
USP39-210ENST00000459775 HYPMO75409 117 aa7.86□□□□□ -1.15
USP39-210ENST00000459775 HOXD3P31249 432 aaPredicted RBP7.86□□□□□ -1.15
USP39-210ENST00000459775 SYNJ2BPP57105 145 aa7.86□□□□□ -1.15
USP39-210ENST00000459775 PMVKQ15126 192 aa7.86□□□□□ -1.15
USP39-210ENST00000459775 ACOT6Q3I5F7 207 aaPredicted RBP7.86□□□□□ -1.15
USP39-210ENST00000459775 C10orf113Q5VZT2 155 aa7.86□□□□□ -1.15
USP39-210ENST00000459775 LINC01559Q495D7 138 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 SPSB3Q6PJ21 355 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 IL34Q6ZMJ4 242 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 TMEM101Q96IK0 257 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 MRPS16Q9Y3D3 137 aaKnown RBP7.85□□□□□ -1.15
USP39-210ENST00000459775 UMAD1C9J7I0 102 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 CSN3P07498 182 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 PYYP10082 97 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 GP9P14770 177 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 TDRG1Q3Y452 100 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 GATD1Q8NB37 220 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 OR5A1Q8NGJ0 315 aa7.85□□□□□ -1.15
USP39-210ENST00000459775 C4orf3Q8WVX3 66 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms