RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 FABP5P3A8MUU1 101 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 F8W735 103 aaPredicted RBP7.98□□□□□ -1.13
CLIP4-208ENST00000456385 HOXA3O43365 443 aaPredicted RBP7.98□□□□□ -1.13
CLIP4-208ENST00000456385 BSPH1Q075Z2 132 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 LAGE3Q14657 143 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 CFHR4Q92496 578 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 C1QTNF4Q9BXJ3 329 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 KLK15Q9H2R5 256 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 GATA3P23771 443 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 XGP55808 180 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 ZFP2Q6ZN57 461 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 Q6ZQT7 251 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 IL17RELQ6ZVW7 336 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 NRACQ8N912 160 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 ZGRF1Q86YA3 2104 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 BSNQ9UPA5 3926 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 IGKV3D-20A0A0C4DH25 116 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 TIMM23O14925 209 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 ASCL5Q7RTU5 278 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 RNF182Q8N6D2 247 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 ZNF418Q8TF45 676 aaPredicted RBP7.97□□□□□ -1.13
CLIP4-208ENST00000456385 FANCD2OSQ96PS1 177 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 UFC1Q9Y3C8 167 aa7.97□□□□□ -1.13
CLIP4-208ENST00000456385 PCNX1Q96RV3 2341 aa7.96□□□□□ -1.13
CLIP4-208ENST00000456385 RPL7P18124 248 aaKnown RBP7.96□□□□□ -1.13
CLIP4-208ENST00000456385 PSMB2P49721 201 aa7.96□□□□□ -1.13
CLIP4-208ENST00000456385 LOC107984156A0A0G2JMH3 177 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 LINC01549A6NIU2 74 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 OR11H12B2RN74 326 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 LYNX1G3V0Z9 82 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 LGALS1P09382 135 aaKnown RBP7.96□□□□□ -1.14
CLIP4-208ENST00000456385 LYNX1P0DP58 116 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 PLNP26678 52 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 DEFB109BQ30KR1 87 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 LINC01559Q495D7 138 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 Q6ZUT4 128 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 ARL17AQ8IVW1 177 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 OR11H1Q8NG94 326 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 OR11H2Q8NH07 326 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 KAAG1Q9UBP8 84 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 POLEQ07864 2286 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 WNK2Q9Y3S1 2297 aa7.96□□□□□ -1.14
CLIP4-208ENST00000456385 ASH1LQ9NR48 2969 aaKnown RBP7.96□□□□□ -1.14
CLIP4-208ENST00000456385 KLRD1Q13241 179 aa7.95□□□□□ -1.14
CLIP4-208ENST00000456385 RAB1BQ9H0U4 201 aa7.95□□□□□ -1.14
CLIP4-208ENST00000456385 F8VRH5 84 aa7.95□□□□□ -1.14
CLIP4-208ENST00000456385 MFAP4P55083 255 aa7.95□□□□□ -1.14
CLIP4-208ENST00000456385 DLX4Q92988 240 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-208ENST00000456385 RNF183Q96D59 192 aa7.95□□□□□ -1.14
CLIP4-208ENST00000456385 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
CLIP4-208ENST00000456385 H7C1H1 209 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 SRSF2Q01130 221 aaKnown RBP7.94□□□□□ -1.14
CLIP4-208ENST00000456385 ZNF672Q499Z4 452 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-208ENST00000456385 RNASE6Q93091 150 aaKnown RBP7.94□□□□□ -1.14
CLIP4-208ENST00000456385 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 C21orf62Q9NYP8 219 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 RALYQ9UKM9 306 aaKnown RBP7.94□□□□□ -1.14
CLIP4-208ENST00000456385 CNOT1A5YKK6 2376 aaKnown RBP7.94□□□□□ -1.14
CLIP4-208ENST00000456385 IGLV11-55A0A075B6I3 123 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 IGHV3-66A0A0C4DH42 116 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 PRSS29PA6NIE9 313 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 SPRY2O43597 315 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 TSPAN13O95857 204 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 TMEM78Q5T7P6 136 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 ZNF48Q96MX3 618 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-208ENST00000456385 SRSF8Q9BRL6 282 aaKnown RBP7.94□□□□□ -1.14
CLIP4-208ENST00000456385 ONECUT1Q9UBC0 465 aa7.94□□□□□ -1.14
CLIP4-208ENST00000456385 ZFHX3Q15911 3703 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 IGHV7-4-1A0A0J9YVY3 117 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 LY6LH3BQJ8 138 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 NBR2O15453 112 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 TGFAP01135 160 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 CTSGP08311 255 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 NDPQ00604 133 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 ATP6V0E2Q8NHE4 81 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 VKORC1Q9BQB6 163 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 PRADC1Q9BSG0 188 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 RAXQ9Y2V3 346 aa7.93□□□□□ -1.14
CLIP4-208ENST00000456385 IGHV3OR16-13A0A075B7E8 117 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 IGHV3-74A0A0B4J1X5 117 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 HES1Q14469 280 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 SCGB1D4Q6XE38 83 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 SCGB3A1Q96QR1 104 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 KIR2DL4Q99706 377 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 DYNLRB1Q9NP97 96 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 ZNF815PA8K554 130 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 SRSF9Q13242 221 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLIP4-208ENST00000456385 AGPAT4-IT1Q9H0P7 198 aa7.92□□□□□ -1.14
CLIP4-208ENST00000456385 TRAV12-1A0A0B4J245 112 aa7.91□□□□□ -1.14
CLIP4-208ENST00000456385 LINC01619G3V211 115 aa7.91□□□□□ -1.14
CLIP4-208ENST00000456385 SPANXN1Q5VSR9 72 aa7.91□□□□□ -1.14
CLIP4-208ENST00000456385 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
CLIP4-208ENST00000456385 RNF5Q99942 180 aa7.91□□□□□ -1.14
CLIP4-208ENST00000456385 ARHGAP32A7KAX9 2087 aa7.91□□□□□ -1.14
CLIP4-208ENST00000456385 SLC25A16P16260 332 aa7.91□□□□□ -1.14
CLIP4-208ENST00000456385 UBE2D1P51668 147 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms