RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 ZNF71Q9NQZ8 489 aaPredicted RBP7.58□□□□□ -1.2
LINC01940-201ENST00000455228 CEP250Q9BV73 2442 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 C10orf55Q5SWW7 151 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 PCP2Q8IVA1 136 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 FXYD5Q96DB9 178 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 NDUFA4L2Q9NRX3 87 aa7.58□□□□□ -1.2
LINC01940-201ENST00000455228 TRBV25-1A0A075B6N4 114 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 H3BTX0 84 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 LHBP01229 141 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 PATE2Q6UY27 113 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 RPRMLQ8N4K4 120 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 TMEM190Q8WZ59 177 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 UBE2D1P51668 147 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 PRIMA1Q86XR5 153 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 ANKRD29Q8N6D5 301 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 GFRA4Q9GZZ7 299 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 NHP2Q9NX24 153 aaKnown RBP7.57□□□□□ -1.2
LINC01940-201ENST00000455228 PLXNB1O43157 2135 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 COX7CP15954 63 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 TIRAPP58753 221 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 C9orf153Q5TBE3 101 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 SLC25A15Q9Y619 301 aa7.57□□□□□ -1.2
LINC01940-201ENST00000455228 E7EUB6 86 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 ZNF883P0CG24 379 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 GAFA1Q96PS6 74 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 SCNM1Q9BWG6 230 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 ZNF138P52744 262 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 WT1-ASQ06250 92 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 HRCT1Q6UXD1 115 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 ZNF493Q6ZR52 646 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
LINC01940-201ENST00000455228 RBAKDNA6NC62 111 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 A8MWV9 139 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 LOXP28300 417 aaPredicted RBP7.55□□□□□ -1.2
LINC01940-201ENST00000455228 LYRM7Q5U5X0 104 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 HCP5Q6MZN7 132 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 FDCSPQ8NFU4 85 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 PYGO1Q9Y3Y4 419 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 APELAP0DMC3 54 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 ZNF415Q09FC8 603 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 TMEM30BQ3MIR4 351 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 FAM57AQ8TBR7 257 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 FMC1Q96HJ9 113 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 IGHV3-21A0A0B4J1V1 117 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 WT1P19544 449 aaPredicted RBP7.55□□□□□ -1.2
LINC01940-201ENST00000455228 ZC2HC1BQ5TFG8 222 aa7.55□□□□□ -1.2
LINC01940-201ENST00000455228 TANC2Q9HCD6 1990 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 TRAV17A0A0B4J275 112 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 ATP5LO75964 103 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 APOHP02749 345 aaPredicted RBP7.54□□□□□ -1.2
LINC01940-201ENST00000455228 CCL3L1P16619 93 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 RPL35AP18077 110 aaKnown RBP7.54□□□□□ -1.2
LINC01940-201ENST00000455228 CCL8P80075 99 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 DSCAML1Q8TD84 2053 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 MYMXA0A1B0GTQ4 84 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 WI2-2373I1.2A0A1W2PRP0 233 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 TIMM23O14925 209 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 VMA21Q3ZAQ7 101 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 LINC00322Q6ZN03 302 aaPredicted RBP7.54□□□□□ -1.2
LINC01940-201ENST00000455228 ZNF833PQ6ZTB9 187 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 UPK3BQ9BT76 320 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 Q9H3A6 140 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 C16orf95Q9H693 158 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 MRPL36Q9P0J6 103 aaKnown RBP7.54□□□□□ -1.2
LINC01940-201ENST00000455228 IGHV1-46P01743 117 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 CXCL5P42830 114 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 TMEM167AQ8TBQ9 72 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 C20orf173Q96LM9 149 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 PRSS22Q9GZN4 317 aa7.54□□□□□ -1.2
LINC01940-201ENST00000455228 DYSFO75923 2080 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 IGKV1D-37A0A075B6S9 117 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 LTAP01374 205 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 TCRAP04437 139 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 PRNTQ86SH4 94 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 U3KQK5 164 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 TRAV8-1A0A0A6YYK1 113 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 NPYP01303 97 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 Q71RC1 249 aaPredicted RBP7.53□□□□□ -1.2
LINC01940-201ENST00000455228 C15orf53Q8NAA6 179 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 TRGV9Q99603 122 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 NDUFC2-KCTD14E9PQ53 114 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 CD59P13987 128 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 MYCNOSP40205 109 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 GOLT1AQ6ZVE7 132 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 C5orf38Q86SI9 138 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 ZCCHC24Q8N2G6 241 aaKnown RBP7.53□□□□□ -1.2
LINC01940-201ENST00000455228 THAP8Q8NA92 274 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 PRSS3P2Q8NHM4 247 aa7.53□□□□□ -1.2
LINC01940-201ENST00000455228 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 J3QQQ9 107 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 HAX1O00165 279 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 LGALS1P09382 135 aaKnown RBP7.52□□□□□ -1.21
LINC01940-201ENST00000455228 LYZP61626 148 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.21
LINC01940-201ENST00000455228 CD7P09564 240 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms