RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 F6UB75 175 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 MGPP08493 103 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 CRIP1P50238 77 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 FABP5P3A8MUU1 101 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 K7EP13 123 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 MOB4Q9Y3A3 225 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 HIVEP2P31629 2446 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 IGHV1-69DA0A0B4J2H0 117 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 OOSP1A8MZH6 123 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 SAP30O75446 220 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 IGHV1-69P01742 117 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
SMPD4-213ENST00000454468 HIST2H2BDQ6DRA6 164 aa9.3□□□□□ -0.92
SMPD4-213ENST00000454468 FAM110DQ8TAY7 271 aaPredicted RBP9.3□□□□□ -0.92
SMPD4-213ENST00000454468 SRSF8Q9BRL6 282 aaKnown RBP9.3□□□□□ -0.92
SMPD4-213ENST00000454468 C19orf71A6NCJ1 209 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 FBLL1A6NHQ2 334 aaKnown RBP9.29□□□□□ -0.92
SMPD4-213ENST00000454468 IGLV2-11P01706 119 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 PPBPP02775 128 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 NMUP48645 174 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 FAM106AQ4KMX7 169 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 GTF2H5Q6ZYL4 71 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 C11orf44Q8N8P7 122 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 ZNF492Q9P255 531 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 FASNP49327 2511 aaKnown RBP9.29□□□□□ -0.92
SMPD4-213ENST00000454468 JMJD1CQ15652 2540 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 A0A1B0GV72 72 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 WI2-2373I1.2A0A1W2PRP0 233 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 H3BVH4 76 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 OVOL3O00110 214 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 GATA1P15976 413 aaPredicted RBP9.29□□□□□ -0.92
SMPD4-213ENST00000454468 TM4SF20Q53R12 229 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
SMPD4-213ENST00000454468 F5H697 171 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 IGLL1P15814 213 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 Q6ZQT7 251 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 Q6ZS46 218 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 ORMDL3Q8N138 153 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 OR10AG1Q8NH19 301 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 TRAV26-2A0A0B4J265 109 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 RNASE4P34096 147 aaKnown RBP9.28□□□□□ -0.92
SMPD4-213ENST00000454468 PRSS57Q6UWY2 283 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 TEX43Q6ZNM6 134 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 WIPF2Q8TF74 440 aaPredicted RBP9.28□□□□□ -0.92
SMPD4-213ENST00000454468 GTSF1LQ9H1H1 148 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 C1orf122Q6ZSJ8 110 aa9.28□□□□□ -0.92
SMPD4-213ENST00000454468 MRPL52Q86TS9 123 aaKnown RBP9.28□□□□□ -0.92
SMPD4-213ENST00000454468 RASL11AQ6T310 242 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 UNQ9165/PRO28630Q6UXU0 137 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 LYPD1Q8N2G4 141 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 OR4X2Q8NGF9 303 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 OR1N2Q8NGR9 330 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 ZNF502Q8TBZ5 544 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 PRSS22Q9GZN4 317 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 FN1P02751 2386 aaKnown RBP9.27□□□□□ -0.93
SMPD4-213ENST00000454468 TRAV9-2A0A087WT02 112 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
SMPD4-213ENST00000454468 SYS1-DBNDD2H3BUS1 97 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 LOXL1Q08397 574 aaPredicted RBP9.27□□□□□ -0.93
SMPD4-213ENST00000454468 FOXE3Q13461 319 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 CCDC140Q96MF4 163 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 SMAD5-AS1Q9Y6J3 95 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 RNF223E7ERA6 249 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 NUDT3O95989 172 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 MSMBP08118 114 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 COX6B1P14854 86 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 CACNG7P62955 275 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 AGPAT4-IT1Q9H0P7 198 aa9.27□□□□□ -0.93
SMPD4-213ENST00000454468 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
SMPD4-213ENST00000454468 SMAD7O15105 426 aaKnown RBP9.26□□□□□ -0.93
SMPD4-213ENST00000454468 BUB3O43684 328 aa9.26□□□□□ -0.93
SMPD4-213ENST00000454468 PRORYQ9H606 182 aa9.26□□□□□ -0.93
SMPD4-213ENST00000454468 FCER1GP30273 86 aa9.26□□□□□ -0.93
SMPD4-213ENST00000454468 PDE6HQ13956 83 aa9.26□□□□□ -0.93
SMPD4-213ENST00000454468 C5orf56Q8N8D9 126 aa9.26□□□□□ -0.93
SMPD4-213ENST00000454468 IGF1P05019 195 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 A0A1B0GXF2 115 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 GAGE10A6NGK3 116 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 IGHV4-59P01825 116 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 IGLC3P0DOY3 106 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
SMPD4-213ENST00000454468 NAA38Q9BRA0 125 aaKnown RBP9.25□□□□□ -0.93
SMPD4-213ENST00000454468 NPYP01303 97 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 CT83Q5H943 113 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 FAM74A4Q5TZK3 123 aa9.25□□□□□ -0.93
SMPD4-213ENST00000454468 HAX1O00165 279 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 ZNF688P0C7X2 276 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 C10orf99Q6UWK7 81 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 NPFFR1Q9GZQ6 430 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 BEX4Q9NWD9 120 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-213ENST00000454468 PHLDA3Q9Y5J5 127 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 CUBNO60494 3623 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 C7orf71A4D174 169 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 MAP1LC3AQ9H492 121 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms