RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ZNF493Q6ZR52 646 aa20.01■□□□□ 0.79
SMARCC1-203ENST00000454240 TMEM75Q8N9X5 138 aa20.01■□□□□ 0.79
SMARCC1-203ENST00000454240 RNASE8Q8TDE3 154 aaKnown RBP20.01■□□□□ 0.79
SMARCC1-203ENST00000454240 C16orf74Q96GX8 76 aa20.01■□□□□ 0.79
SMARCC1-203ENST00000454240 LINC00467Q9BRT7 94 aa20.01■□□□□ 0.79
SMARCC1-203ENST00000454240 PSG8Q9UQ74 426 aa20.01■□□□□ 0.79
SMARCC1-203ENST00000454240 FBLL1A6NHQ2 334 aaKnown RBP20■□□□□ 0.79
SMARCC1-203ENST00000454240 PPT1P50897 306 aa20■□□□□ 0.79
SMARCC1-203ENST00000454240 C12orf74Q32Q52 190 aa20■□□□□ 0.79
SMARCC1-203ENST00000454240 FAM222AQ5U5X8 452 aa20■□□□□ 0.79
SMARCC1-203ENST00000454240 CST9LP1Q5W188 147 aa20■□□□□ 0.79
SMARCC1-203ENST00000454240 Q6ZQT7 251 aa20■□□□□ 0.79
SMARCC1-203ENST00000454240 TMEM263Q8WUH6 116 aaKnown RBP20■□□□□ 0.79
SMARCC1-203ENST00000454240 PHLDA1Q8WV24 401 aaPredicted RBP20■□□□□ 0.79
SMARCC1-203ENST00000454240 HIST1H2BAQ96A08 127 aa20■□□□□ 0.79
SMARCC1-203ENST00000454240 PEX7O00628 323 aa19.99■□□□□ 0.79
SMARCC1-203ENST00000454240 CCL20P78556 96 aa19.99■□□□□ 0.79
SMARCC1-203ENST00000454240 FLI1Q01543 452 aaPredicted RBP19.99■□□□□ 0.79
SMARCC1-203ENST00000454240 Q6AWC8 147 aa19.99■□□□□ 0.79
SMARCC1-203ENST00000454240 LINC00479Q96M42 142 aa19.99■□□□□ 0.79
SMARCC1-203ENST00000454240 TCEAL7Q9BRU2 100 aa19.99■□□□□ 0.79
SMARCC1-203ENST00000454240 TREM1Q9NP99 234 aa19.99■□□□□ 0.79
SMARCC1-203ENST00000454240 DYNC2H1Q8NCM8 4307 aaKnown RBP19.98■□□□□ 0.79
SMARCC1-203ENST00000454240 TEX48A0A1B0GUV7 120 aa19.98■□□□□ 0.79
SMARCC1-203ENST00000454240 ATP5G3P48201 142 aa19.98■□□□□ 0.79
SMARCC1-203ENST00000454240 CEMP1Q6PRD7 247 aaPredicted RBP19.98■□□□□ 0.79
SMARCC1-203ENST00000454240 NUPR2A6NF83 97 aa19.97■□□□□ 0.79
SMARCC1-203ENST00000454240 TEX46H3BTG2 121 aa19.97■□□□□ 0.79
SMARCC1-203ENST00000454240 ALKAL2Q6UX46 152 aa19.97■□□□□ 0.79
SMARCC1-203ENST00000454240 Q6ZTC4 211 aa19.97■□□□□ 0.79
SMARCC1-203ENST00000454240 ZNF767PQ75MW2 155 aa19.96■□□□□ 0.79
SMARCC1-203ENST00000454240 PRNTQ86SH4 94 aa19.96■□□□□ 0.79
SMARCC1-203ENST00000454240 NDFIP1Q9BT67 221 aa19.96■□□□□ 0.79
SMARCC1-203ENST00000454240 TRAV34A0A0B4J273 112 aa19.95■□□□□ 0.78
SMARCC1-203ENST00000454240 LYRM9A8MSI8 78 aa19.95■□□□□ 0.78
SMARCC1-203ENST00000454240 F6UZH7 168 aa19.95■□□□□ 0.78
SMARCC1-203ENST00000454240 ANXA2RQ3ZCQ2 193 aa19.95■□□□□ 0.78
SMARCC1-203ENST00000454240 EIF4E3Q8N5X7 224 aaKnown RBP19.95■□□□□ 0.78
SMARCC1-203ENST00000454240 TENM2Q9NT68 2774 aa19.94■□□□□ 0.78
SMARCC1-203ENST00000454240 IGHV1OR15-1A0A075B7D0 117 aa19.94■□□□□ 0.78
SMARCC1-203ENST00000454240 C11orf94C9JXX5 98 aa19.94■□□□□ 0.78
SMARCC1-203ENST00000454240 MANBALQ9NQG1 85 aa19.94■□□□□ 0.78
SMARCC1-203ENST00000454240 TIMM8BQ9Y5J9 83 aaPredicted RBP19.94■□□□□ 0.78
SMARCC1-203ENST00000454240 RGS13O14921 159 aa19.93■□□□□ 0.78
SMARCC1-203ENST00000454240 SAPCD1Q5SSQ6 148 aa19.93■□□□□ 0.78
SMARCC1-203ENST00000454240 C8orf49Q96NF6 230 aa19.93■□□□□ 0.78
SMARCC1-203ENST00000454240 GNG13Q9P2W3 67 aa19.93■□□□□ 0.78
SMARCC1-203ENST00000454240 KLF12Q9Y4X4 402 aa19.93■□□□□ 0.78
SMARCC1-203ENST00000454240 CBY3A6NI87 242 aa19.92■□□□□ 0.78
SMARCC1-203ENST00000454240 TRAV21A0A0B4J279 112 aa19.91■□□□□ 0.78
SMARCC1-203ENST00000454240 C11orf72Q8NBR9 251 aa19.91■□□□□ 0.78
SMARCC1-203ENST00000454240 ZNF680Q8NEM1 530 aa19.91■□□□□ 0.78
SMARCC1-203ENST00000454240 TP53TG3Q9ULZ0 132 aa19.91■□□□□ 0.78
SMARCC1-203ENST00000454240 KLK5Q9Y337 293 aaPredicted RBP19.91■□□□□ 0.78
SMARCC1-203ENST00000454240 TRAV10A0A0B4J240 114 aa19.9■□□□□ 0.78
SMARCC1-203ENST00000454240 FMC1Q96HJ9 113 aa19.9■□□□□ 0.78
SMARCC1-203ENST00000454240 NOP10Q9NPE3 64 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-203ENST00000454240 TRBV6-1A0A0K0K1D8 114 aa19.89■□□□□ 0.77
SMARCC1-203ENST00000454240 ZNF80P51504 273 aaPredicted RBP19.89■□□□□ 0.77
SMARCC1-203ENST00000454240 PLECQ15149 4684 aaKnown RBP19.89■□□□□ 0.77
SMARCC1-203ENST00000454240 SMUG1Q53HV7 270 aa19.89■□□□□ 0.77
SMARCC1-203ENST00000454240 MUC21Q5SSG8 566 aa19.89■□□□□ 0.77
SMARCC1-203ENST00000454240 Q86TA4 180 aa19.89■□□□□ 0.77
SMARCC1-203ENST00000454240 SNURFLB1AK76 121 aa19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 DAD1P61803 113 aa19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 BLOC1S1P78537 153 aa19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 TMEM183BQ1AE95 376 aa19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 TDRG1Q3Y452 100 aa19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 IBA57Q5T440 356 aaKnown RBP19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 C2CD4CQ8TF44 421 aa19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 GSN-AS1Q9NRJ2 163 aa19.88■□□□□ 0.77
SMARCC1-203ENST00000454240 SCO2A0A1W2PP80 73 aa19.87■□□□□ 0.77
SMARCC1-203ENST00000454240 GCGP01275 180 aa19.87■□□□□ 0.77
SMARCC1-203ENST00000454240 DAZ2Q13117 558 aaKnown RBP19.87■□□□□ 0.77
SMARCC1-203ENST00000454240 FAM159AQ6UWV7 190 aa19.87■□□□□ 0.77
SMARCC1-203ENST00000454240 TXNDC17Q9BRA2 123 aa19.87■□□□□ 0.77
SMARCC1-203ENST00000454240 DEFB131BA0A096LNP1 70 aa19.86■□□□□ 0.77
SMARCC1-203ENST00000454240 AKR1C3P42330 323 aa19.86■□□□□ 0.77
SMARCC1-203ENST00000454240 UBE2G1P62253 170 aa19.86■□□□□ 0.77
SMARCC1-203ENST00000454240 ZFP30Q9Y2G7 519 aa19.86■□□□□ 0.77
SMARCC1-203ENST00000454240 DEFB130BP0DP73 79 aa19.85■□□□□ 0.77
SMARCC1-203ENST00000454240 DEFB130AP0DP74 79 aa19.85■□□□□ 0.77
SMARCC1-203ENST00000454240 TCL1AP56279 114 aa19.85■□□□□ 0.77
SMARCC1-203ENST00000454240 COX8CQ7Z4L0 72 aa19.85■□□□□ 0.77
SMARCC1-203ENST00000454240 LINC00612Q8N6U2 182 aa19.85■□□□□ 0.77
SMARCC1-203ENST00000454240 LYPD6BQ8NI32 183 aa19.85■□□□□ 0.77
SMARCC1-203ENST00000454240 KMT2CQ8NEZ4 4911 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-203ENST00000454240 IFNA1P01562 189 aa19.84■□□□□ 0.77
SMARCC1-203ENST00000454240 S100A9P06702 114 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-203ENST00000454240 PFN1P07737 140 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-203ENST00000454240 LYSTQ99698 3801 aa19.84■□□□□ 0.77
SMARCC1-203ENST00000454240 LTAP01374 205 aa19.83■□□□□ 0.77
SMARCC1-203ENST00000454240 NAGKQ9UJ70 344 aa19.83■□□□□ 0.77
SMARCC1-203ENST00000454240 BCL2P10415 239 aa19.82■□□□□ 0.76
SMARCC1-203ENST00000454240 MEF2BQ02080 365 aaPredicted RBP19.82■□□□□ 0.76
SMARCC1-203ENST00000454240 C11orf52Q96A22 123 aa19.82■□□□□ 0.76
SMARCC1-203ENST00000454240 MDFICQ9P1T7 246 aa19.82■□□□□ 0.76
SMARCC1-203ENST00000454240 C11orf21Q9P2W6 132 aa19.82■□□□□ 0.76
SMARCC1-203ENST00000454240 TRGV11A0A075B6L2 103 aa19.81■□□□□ 0.76
SMARCC1-203ENST00000454240 ZNF415Q09FC8 603 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms