RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 Q6AWC8 147 aa8.97□□□□□ -0.97
VTA1-203ENST00000452973 FBLL1A6NHQ2 334 aaKnown RBP8.97□□□□□ -0.97
VTA1-203ENST00000452973 H0Y8G0 127 aa8.97□□□□□ -0.97
VTA1-203ENST00000452973 CFHR3Q02985 330 aa8.97□□□□□ -0.97
VTA1-203ENST00000452973 GPHB5Q86YW7 130 aa8.97□□□□□ -0.97
VTA1-203ENST00000452973 C14orf144Q96I85 54 aa8.97□□□□□ -0.97
VTA1-203ENST00000452973 DAZ1Q9NQZ3 744 aaKnown RBP8.97□□□□□ -0.97
VTA1-203ENST00000452973 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
VTA1-203ENST00000452973 SMKR1H3BMG3 65 aa8.96□□□□□ -0.97
VTA1-203ENST00000452973 LINC00614P0C842 121 aa8.96□□□□□ -0.97
VTA1-203ENST00000452973 PSMB8P28062 276 aa8.96□□□□□ -0.97
VTA1-203ENST00000452973 PCP4P48539 62 aa8.96□□□□□ -0.97
VTA1-203ENST00000452973 ATP6V0BQ99437 205 aa8.96□□□□□ -0.97
VTA1-203ENST00000452973 VAMP8Q9BV40 100 aa8.96□□□□□ -0.97
VTA1-203ENST00000452973 FAM181BA6NEQ2 426 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 D6R8Y8 96 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 HIST1H1AQ02539 215 aaPredicted RBP8.96□□□□□ -0.98
VTA1-203ENST00000452973 HIST2H2BDQ6DRA6 164 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 WFDC12Q8WWY7 111 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 C11orf21Q9P2W6 132 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 IGHV7-4-1A0A0J9YVY3 117 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 RBAKDNA6NC62 111 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 FAM106AQ4KMX7 169 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 EBLN2Q6P2I7 272 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 C9orf139Q6ZV77 190 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 WFDC11Q8NEX6 87 aa8.96□□□□□ -0.98
VTA1-203ENST00000452973 NF1P21359 2839 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 ITPR2Q14571 2701 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 PRSS47A8MTI9 375 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 NCR2O95944 276 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 LINC00173Q6ZV60 143 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 ZNF575Q86XF7 245 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 PRSS3P2Q8NHM4 247 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 IGKV3D-20A0A0C4DH25 116 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 Q6YL49 198 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 COX8CQ7Z4L0 72 aa8.95□□□□□ -0.98
VTA1-203ENST00000452973 IGHV1-24A0A0C4DH33 117 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 SPRY2O43597 315 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 RPS20P60866 119 aaKnown RBP8.94□□□□□ -0.98
VTA1-203ENST00000452973 Q8N976 141 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 OR10J6PQ8NGY7 276 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 MTORP42345 2549 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 FXYD7P58549 80 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 PRR9Q5T870 116 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 MCRIP2Q9BUT9 160 aaKnown RBP8.94□□□□□ -0.98
VTA1-203ENST00000452973 A0A1B0GW15 77 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 KIR3DS1Q14943 382 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 MAJINQ3KP22 176 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 ANKRD39Q53RE8 183 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 ZNF705AQ6ZN79 300 aaPredicted RBP8.94□□□□□ -0.98
VTA1-203ENST00000452973 TEX43Q6ZNM6 134 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 SMPXQ9UHP9 88 aa8.94□□□□□ -0.98
VTA1-203ENST00000452973 A0A1B0GV90 55 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 IGLC6P0CF74 106 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 CKS2P33552 79 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
VTA1-203ENST00000452973 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 C9orf47Q6ZRZ4 202 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 PRELID3AQ96N28 172 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 BRI3O95415 125 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
VTA1-203ENST00000452973 KHDC1LQ5JSQ8 128 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 REC114Q7Z4M0 266 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 NOTCH2Q04721 2471 aa8.93□□□□□ -0.98
VTA1-203ENST00000452973 DEFB136Q30KP8 78 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
VTA1-203ENST00000452973 CTRLP40313 264 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 LINC01559Q495D7 138 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 KRTAP1-3Q8IUG1 177 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 ORMDL3Q8N138 153 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 OR10AG1Q8NH19 301 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 NDUFAF3Q9BU61 184 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 ZNF702PQ9H963 129 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
VTA1-203ENST00000452973 SOCS3O14543 225 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 GAS8-AS1O95177 125 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 FSHBP01225 129 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 RNASE4P34096 147 aaKnown RBP8.91□□□□□ -0.98
VTA1-203ENST00000452973 PRSS57Q6UWY2 283 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 ZNF493Q6ZR52 646 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 LRRC75A-AS1Q8N1F1 130 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
VTA1-203ENST00000452973 C2orf70A6NJV1 201 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 SPATA45Q537H7 98 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 SPATA12Q7Z6I5 190 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 UFC1Q9Y3C8 167 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 IGHV4OR15-8A0A075B7B6 117 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 A0A087WW49 117 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 KIR2DL5BA0A0G2JN68 375 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 KIR2DL5BA0A0G2JPC4 375 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 H3BVH4 76 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 ZNF688P0C7X2 276 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 EVI2AP22794 236 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 G0S2P27469 103 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 C18orf65Q6ZTR6 163 aa8.91□□□□□ -0.98
VTA1-203ENST00000452973 KIR2DL5AQ8N109 375 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms