RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 IGHV1-69DA0A0B4J2H0 117 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 H3BTX0 84 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 ATOX1O00244 68 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 ORM1P02763 201 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 PF4P02776 101 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 RFPL3SP0C7P2 107 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 ERCC8Q13216 396 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 IGFBPL1Q8WX77 278 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 DEFB118Q96PH6 123 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 ABCA7Q8IZY2 2146 aa6.51□□□□□ -1.37
SMCO1-202ENST00000452776 IGHV4-4A0A075B6R2 117 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 TEX49A0A1B0GTD5 131 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 ZNHIT1O43257 154 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 TMEM263Q8WUH6 116 aaKnown RBP6.5□□□□□ -1.37
SMCO1-202ENST00000452776 C8orf49Q96NF6 230 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 SLC50A1Q9BRV3 221 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 DIDO1Q9BTC0 2240 aaKnown RBP6.5□□□□□ -1.37
SMCO1-202ENST00000452776 TRAV17A0A0B4J275 112 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 LOC107984640A0A0U1RRK4 108 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 MRPS12O15235 138 aaKnown RBP6.5□□□□□ -1.37
SMCO1-202ENST00000452776 IGHV3-13P01766 116 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 TRPT1Q86TN4 253 aaKnown RBP6.5□□□□□ -1.37
SMCO1-202ENST00000452776 NRACQ8N912 160 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 SMIM2Q9BVW6 85 aa6.5□□□□□ -1.37
SMCO1-202ENST00000452776 MRPL36Q9P0J6 103 aaKnown RBP6.5□□□□□ -1.37
SMCO1-202ENST00000452776 IGHV3-64DA0A0J9YX35 117 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 C11orf86A6NJI1 115 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 CGB1A6NKQ9 187 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 OOSP1A8MZH6 123 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 CRYGDP07320 174 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 RPL27AP46776 148 aaKnown RBP6.49□□□□□ -1.37
SMCO1-202ENST00000452776 Q1RN00 199 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 FAM201AQ5SY85 155 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 ZNF474Q6S9Z5 364 aaPredicted RBP6.49□□□□□ -1.37
SMCO1-202ENST00000452776 LEAP2Q969E1 77 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 TMEM141Q96I45 108 aa6.49□□□□□ -1.37
SMCO1-202ENST00000452776 RBAKDNA6NC62 111 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 LHBP01229 141 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 FOLR3P41439 243 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 LINC00311Q8N616 119 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 METTL26Q96S19 204 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 DYNLRB1Q9NP97 96 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 HEATR1Q9H583 2144 aaKnown RBP6.48□□□□□ -1.37
SMCO1-202ENST00000452776 PCSK5Q92824 1860 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 AGRNO00468 2067 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 IGHV1OR15-9A0A0B4J2B8 117 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 A0A0J9YX75 114 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 C17orf100A8MU93 164 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 M0R381 172 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
SMCO1-202ENST00000452776 CRIP2P52943 208 aaPredicted RBP6.48□□□□□ -1.37
SMCO1-202ENST00000452776 DLX1P56177 255 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 ZNRF1Q8ND25 227 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 DPH3Q96FX2 82 aa6.48□□□□□ -1.37
SMCO1-202ENST00000452776 E7EUB6 86 aa6.47□□□□□ -1.37
SMCO1-202ENST00000452776 IGHV3-48P01763 117 aa6.47□□□□□ -1.37
SMCO1-202ENST00000452776 CNTFRP26992 372 aa6.47□□□□□ -1.37
SMCO1-202ENST00000452776 C5orf38Q86SI9 138 aa6.47□□□□□ -1.37
SMCO1-202ENST00000452776 KIR2DL5BQ8NHK3 375 aa6.47□□□□□ -1.37
SMCO1-202ENST00000452776 SZT2Q5T011 3432 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 IGHV5-10-1A0A0J9YXX1 117 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 SDHAF1A6NFY7 115 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 H7C423 109 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 IGLV2-23P01705 113 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 IGHV4-39P01824 125 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 TFF1P04155 84 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 CD59P13987 128 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 EFNA4P52798 201 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 TCF15Q12870 199 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 GUSBP11Q6P575 273 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 C2orf66Q6UXQ4 117 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 EDA2RQ9HAV5 297 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 MSRB1Q9NZV6 116 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 LINC00527Q9UJ94 153 aa6.46□□□□□ -1.37
SMCO1-202ENST00000452776 A0A0G2JNJ9 132 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
SMCO1-202ENST00000452776 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 J3QQQ9 107 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 OVOL1O14753 267 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 LEPROTO15243 131 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 IGKV3-15P01624 115 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
SMCO1-202ENST00000452776 CCL8P80075 99 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 HCP5Q6MZN7 132 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 RNF125Q96EQ8 232 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 PSMG3-AS1Q96PY0 264 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 PEMTQ9UBM1 199 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 Q9UFV3 132 aa6.46□□□□□ -1.38
SMCO1-202ENST00000452776 MAGEA5P43359 124 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 GATA4P43694 442 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 SDIM1Q6ZPB5 146 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 SLC25A45Q8N413 288 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 ZNF491Q8N8L2 437 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 KLHL30-AS1Q8NEE0 82 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 C17orf77Q96MU5 243 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 RNF7Q9UBF6 113 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms