RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 TCRAP04437 139 aa14.22□□□□□ -0.13
COL9A3-202ENST00000452372 PRR9Q5T870 116 aa14.22□□□□□ -0.13
COL9A3-202ENST00000452372 ZNF767PQ75MW2 155 aa14.22□□□□□ -0.13
COL9A3-202ENST00000452372 CCDC28AQ8IWP9 274 aa14.22□□□□□ -0.13
COL9A3-202ENST00000452372 FAM213BQ8TBF2 198 aa14.22□□□□□ -0.13
COL9A3-202ENST00000452372 RNASE8Q8TDE3 154 aaKnown RBP14.22□□□□□ -0.13
COL9A3-202ENST00000452372 TMEM263Q8WUH6 116 aaKnown RBP14.22□□□□□ -0.13
COL9A3-202ENST00000452372 EPDR1Q9UM22 224 aa14.22□□□□□ -0.13
COL9A3-202ENST00000452372 TRAV10A0A0B4J240 114 aa14.21□□□□□ -0.13
COL9A3-202ENST00000452372 LYRM9A8MSI8 78 aa14.21□□□□□ -0.13
COL9A3-202ENST00000452372 ZFP69Q49AA0 526 aa14.21□□□□□ -0.13
COL9A3-202ENST00000452372 EIF5AL1Q6IS14 154 aaKnown RBP14.21□□□□□ -0.13
COL9A3-202ENST00000452372 SLC51BQ86UW2 128 aa14.21□□□□□ -0.13
COL9A3-202ENST00000452372 LINC00467Q9BRT7 94 aa14.21□□□□□ -0.13
COL9A3-202ENST00000452372 NKX6-2Q9C056 277 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-202ENST00000452372 TRAV8-1A0A0A6YYK1 113 aa14.2□□□□□ -0.14
COL9A3-202ENST00000452372 FAM74A7A6NL05 159 aa14.2□□□□□ -0.14
COL9A3-202ENST00000452372 UBE2G2P60604 165 aa14.2□□□□□ -0.14
COL9A3-202ENST00000452372 C9orf62Q8N4C0 152 aa14.2□□□□□ -0.14
COL9A3-202ENST00000452372 C2CD4CQ8TF44 421 aa14.2□□□□□ -0.14
COL9A3-202ENST00000452372 SFT2D1Q8WV19 159 aa14.2□□□□□ -0.14
COL9A3-202ENST00000452372 K7EQM0 130 aa14.19□□□□□ -0.14
COL9A3-202ENST00000452372 LY6G6CO95867 125 aa14.18□□□□□ -0.14
COL9A3-202ENST00000452372 H2AFB1P0C5Y9 115 aa14.18□□□□□ -0.14
COL9A3-202ENST00000452372 RAB5CP51148 216 aa14.18□□□□□ -0.14
COL9A3-202ENST00000452372 Q6ZQT7 251 aa14.18□□□□□ -0.14
COL9A3-202ENST00000452372 EIF4E3Q8N5X7 224 aaKnown RBP14.18□□□□□ -0.14
COL9A3-202ENST00000452372 CYB561D1Q8N8Q1 229 aa14.18□□□□□ -0.14
COL9A3-202ENST00000452372 TVP23CQ96ET8 276 aa14.18□□□□□ -0.14
COL9A3-202ENST00000452372 ATG101Q9BSB4 218 aa14.18□□□□□ -0.14
COL9A3-202ENST00000452372 TIMM8BQ9Y5J9 83 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-202ENST00000452372 DEFB131BA0A096LNP1 70 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 FBLL1A6NHQ2 334 aaKnown RBP14.17□□□□□ -0.14
COL9A3-202ENST00000452372 IFNA7P01567 189 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 DAD1P61803 113 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 ANXA2RQ3ZCQ2 193 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 Q6AWC8 147 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 SGK494Q96LW2 274 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 TREM1Q9NP99 234 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 PSG8Q9UQ74 426 aa14.17□□□□□ -0.14
COL9A3-202ENST00000452372 DNAH6Q9C0G6 4158 aa14.16□□□□□ -0.14
COL9A3-202ENST00000452372 IGHV1OR15-1A0A075B7D0 117 aa14.16□□□□□ -0.14
COL9A3-202ENST00000452372 RGS13O14921 159 aa14.16□□□□□ -0.14
COL9A3-202ENST00000452372 IGLV2-11P01706 119 aa14.16□□□□□ -0.14
COL9A3-202ENST00000452372 TMEM75Q8N9X5 138 aa14.16□□□□□ -0.14
COL9A3-202ENST00000452372 NOP10Q9NPE3 64 aaKnown RBP14.16□□□□□ -0.14
COL9A3-202ENST00000452372 ARL2-SNX15V9GYD0 113 aa14.16□□□□□ -0.14
COL9A3-202ENST00000452372 CBY3A6NI87 242 aa14.15□□□□□ -0.14
COL9A3-202ENST00000452372 SULT1A2P50226 295 aa14.15□□□□□ -0.14
COL9A3-202ENST00000452372 TCTAP57738 103 aa14.15□□□□□ -0.14
COL9A3-202ENST00000452372 FLI1Q01543 452 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-202ENST00000452372 ZNF680Q8NEM1 530 aa14.15□□□□□ -0.14
COL9A3-202ENST00000452372 HIST1H2BAQ96A08 127 aa14.15□□□□□ -0.14
COL9A3-202ENST00000452372 NDFIP1Q9BT67 221 aa14.15□□□□□ -0.14
COL9A3-202ENST00000452372 A0A1B0GV50 99 aa14.14□□□□□ -0.15
COL9A3-202ENST00000452372 SNURFLB1AK76 121 aa14.14□□□□□ -0.15
COL9A3-202ENST00000452372 IGLL5B9A064 214 aa14.14□□□□□ -0.15
COL9A3-202ENST00000452372 DEFB130BP0DP73 79 aa14.14□□□□□ -0.15
COL9A3-202ENST00000452372 DEFB130AP0DP74 79 aa14.14□□□□□ -0.15
COL9A3-202ENST00000452372 CST9LP1Q5W188 147 aa14.14□□□□□ -0.15
COL9A3-202ENST00000452372 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 PEX7O00628 323 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 PAGE4O60829 102 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 PPT1P50897 306 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 DAZ2Q13117 558 aaKnown RBP14.13□□□□□ -0.15
COL9A3-202ENST00000452372 PRNTQ86SH4 94 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 C11orf72Q8NBR9 251 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 LINC00479Q96M42 142 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 TCEAL7Q9BRU2 100 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 GSN-AS1Q9NRJ2 163 aa14.13□□□□□ -0.15
COL9A3-202ENST00000452372 TRAV21A0A0B4J279 112 aa14.12□□□□□ -0.15
COL9A3-202ENST00000452372 F6UZH7 168 aa14.12□□□□□ -0.15
COL9A3-202ENST00000452372 SAPCD1Q5SSQ6 148 aa14.12□□□□□ -0.15
COL9A3-202ENST00000452372 IBA57Q5T440 356 aaKnown RBP14.12□□□□□ -0.15
COL9A3-202ENST00000452372 TP53TG3Q9ULZ0 132 aa14.12□□□□□ -0.15
COL9A3-202ENST00000452372 APLNQ9ULZ1 77 aa14.12□□□□□ -0.15
COL9A3-202ENST00000452372 TRAV34A0A0B4J273 112 aa14.11□□□□□ -0.15
COL9A3-202ENST00000452372 MUC21Q5SSG8 566 aa14.11□□□□□ -0.15
COL9A3-202ENST00000452372 FAM159AQ6UWV7 190 aa14.11□□□□□ -0.15
COL9A3-202ENST00000452372 LINC00612Q8N6U2 182 aa14.11□□□□□ -0.15
COL9A3-202ENST00000452372 IGHV4-4A0A075B6R2 117 aa14.1□□□□□ -0.15
COL9A3-202ENST00000452372 ATP5G3P48201 142 aa14.1□□□□□ -0.15
COL9A3-202ENST00000452372 TDRG1Q3Y452 100 aa14.1□□□□□ -0.15
COL9A3-202ENST00000452372 FAM210BQ96KR6 192 aa14.1□□□□□ -0.15
COL9A3-202ENST00000452372 C8orf49Q96NF6 230 aa14.1□□□□□ -0.15
COL9A3-202ENST00000452372 KLF12Q9Y4X4 402 aa14.1□□□□□ -0.15
COL9A3-202ENST00000452372 TEX46H3BTG2 121 aa14.09□□□□□ -0.15
COL9A3-202ENST00000452372 HTN3P15516 51 aa14.09□□□□□ -0.15
COL9A3-202ENST00000452372 NKX2-5P52952 324 aaPredicted RBP14.09□□□□□ -0.15
COL9A3-202ENST00000452372 TCL1AP56279 114 aa14.09□□□□□ -0.15
COL9A3-202ENST00000452372 CCL20P78556 96 aa14.09□□□□□ -0.15
COL9A3-202ENST00000452372 SMUG1Q53HV7 270 aa14.09□□□□□ -0.15
COL9A3-202ENST00000452372 GCGP01275 180 aa14.08□□□□□ -0.16
COL9A3-202ENST00000452372 ATP5G1P05496 136 aa14.08□□□□□ -0.16
COL9A3-202ENST00000452372 ZNF80P51504 273 aaPredicted RBP14.08□□□□□ -0.16
COL9A3-202ENST00000452372 SPINK4O60575 86 aa14.07□□□□□ -0.16
COL9A3-202ENST00000452372 ZNF415Q09FC8 603 aa14.07□□□□□ -0.16
COL9A3-202ENST00000452372 LGALS9CQ6DKI2 356 aa14.07□□□□□ -0.16
COL9A3-202ENST00000452372 Q6ZTI0 123 aa14.07□□□□□ -0.16
COL9A3-202ENST00000452372 FMC1Q96HJ9 113 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms