RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TMEM183AQ8IXX5 376 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 CLUHP3Q96NS8 147 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 ODF3Q96PU9 254 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 AGPAT4-IT1Q9H0P7 198 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 RETNQ9HD89 108 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
VPS33A-202ENST00000451053 SNAPINO95295 136 aa9.53□□□□□ -0.88
VPS33A-202ENST00000451053 MORN3Q6PF18 240 aaPredicted RBP9.53□□□□□ -0.88
VPS33A-202ENST00000451053 SGK494Q96LW2 274 aa9.53□□□□□ -0.88
VPS33A-202ENST00000451053 TM2D3Q9BRN9 247 aa9.53□□□□□ -0.88
VPS33A-202ENST00000451053 B4DEV8 164 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 M0R036 132 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 UBE2CO00762 179 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 CT45A10P0DMU9 189 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 MGST1P10620 155 aaKnown RBP9.52□□□□□ -0.89
VPS33A-202ENST00000451053 TSPOP30536 169 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
VPS33A-202ENST00000451053 ADIRFQ15847 76 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 DEFB135Q30KP9 77 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 LINC01551Q86U37 167 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 OCC1Q8TAD7 63 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 Q8TAT8 98 aa9.52□□□□□ -0.89
VPS33A-202ENST00000451053 PRKDCP78527 4128 aaKnown RBP9.51□□□□□ -0.89
VPS33A-202ENST00000451053 M0R2Z0 102 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 IGLV2-8P01709 118 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 LEPP41159 167 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 NUTF2P61970 127 aaKnown RBP9.51□□□□□ -0.89
VPS33A-202ENST00000451053 RHEBQ15382 184 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 SPINK13Q1W4C9 94 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 COX8CQ7Z4L0 72 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 SPATA25Q9BR10 227 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 XCL2Q9UBD3 114 aa9.51□□□□□ -0.89
VPS33A-202ENST00000451053 PGPEP1LA6NFU8 196 aa9.5□□□□□ -0.89
VPS33A-202ENST00000451053 GCGP01275 180 aa9.5□□□□□ -0.89
VPS33A-202ENST00000451053 CRISP2P16562 243 aa9.5□□□□□ -0.89
VPS33A-202ENST00000451053 Q6ZWC4 215 aa9.5□□□□□ -0.89
VPS33A-202ENST00000451053 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
VPS33A-202ENST00000451053 CLRN3Q8NCR9 226 aa9.5□□□□□ -0.89
VPS33A-202ENST00000451053 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
VPS33A-202ENST00000451053 MT-ND4LP03901 98 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 NHLRC4P0CG21 123 aaPredicted RBP9.49□□□□□ -0.89
VPS33A-202ENST00000451053 C15orf54Q8N8G6 183 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 CSNK1G2-AS1Q8NCQ2 148 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 ISOC2Q96AB3 205 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 RNF183Q96D59 192 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 DAZAP1Q96EP5 407 aaKnown RBP9.49□□□□□ -0.89
VPS33A-202ENST00000451053 FAM19A4Q96LR4 140 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 ZMAT4Q9H898 229 aa9.49□□□□□ -0.89
VPS33A-202ENST00000451053 TRAV12-2A0A075B6T6 113 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 K7EN84 100 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 PPP1R2P9O14990 202 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 CRXO43186 299 aaPredicted RBP9.48□□□□□ -0.89
VPS33A-202ENST00000451053 SPRY2O43597 315 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 AMBPP02760 352 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 GPX1P07203 203 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 FAM162BQ5T6X4 162 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 FAM231DQ6ZW35 169 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 ZC2HC1AQ96GY0 325 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 C8orf49Q96NF6 230 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
VPS33A-202ENST00000451053 FABP5P3A8MUU1 101 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 KLLNB2CW77 178 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 J3KRW8 73 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 CDKN1BP46527 198 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 ERVFC1-1P60608 527 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 IBA57Q5T440 356 aaKnown RBP9.47□□□□□ -0.89
VPS33A-202ENST00000451053 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 ANAPC16Q96DE5 110 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 CTDSP1Q9GZU7 261 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 OSTCQ9NRP0 149 aa9.47□□□□□ -0.89
VPS33A-202ENST00000451053 A0A087WWC5 75 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 C7orf77A4D0Y5 90 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 INSP01308 110 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 P01737 135 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
VPS33A-202ENST00000451053 RBMY1A1P0DJD3 496 aaKnown RBP9.46□□□□□ -0.9
VPS33A-202ENST00000451053 RBMY1CP0DJD4 496 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 OR5I1Q13606 314 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 RBMY1FQ15415 496 aaKnown RBP9.46□□□□□ -0.9
VPS33A-202ENST00000451053 C1orf158Q8N1D5 194 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 OR10G8Q8NGN5 311 aa9.46□□□□□ -0.9
VPS33A-202ENST00000451053 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 TRAV21A0A0B4J279 112 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 C7orf71A4D174 169 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 C19orf71A6NCJ1 209 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 PRR9Q5T870 116 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 GFI1BQ5VTD9 330 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 OR11H2Q8NH07 326 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 RPS10P5Q9NQ39 176 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 U3KQK5 164 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 X6R8D5 127 aa9.45□□□□□ -0.9
VPS33A-202ENST00000451053 H7BYZ3 331 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms