RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 PLAC8L1A1L4L8 177 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 LYRM9A8MSI8 78 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 IGLL5B9A064 214 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 RGS13O14921 159 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 DEFB130BP0DP73 79 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 DEFB130AP0DP74 79 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 EIF5AL1Q6IS14 154 aaKnown RBP11.2□□□□□ -0.62
TOP3B-211ENST00000449704 DPPA3Q6W0C5 159 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 Q6ZQT7 251 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 SLC51BQ86UW2 128 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
TOP3B-211ENST00000449704 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
TOP3B-211ENST00000449704 NOP10Q9NPE3 64 aaKnown RBP11.2□□□□□ -0.62
TOP3B-211ENST00000449704 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-211ENST00000449704 LCE6AA0A183 80 aa11.19□□□□□ -0.62
TOP3B-211ENST00000449704 CBY3A6NI87 242 aa11.19□□□□□ -0.62
TOP3B-211ENST00000449704 FAM74A7A6NL05 159 aa11.19□□□□□ -0.62
TOP3B-211ENST00000449704 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
TOP3B-211ENST00000449704 HTN3P15516 51 aa11.19□□□□□ -0.62
TOP3B-211ENST00000449704 C9orf62Q8N4C0 152 aa11.19□□□□□ -0.62
TOP3B-211ENST00000449704 TREM1Q9NP99 234 aa11.19□□□□□ -0.62
TOP3B-211ENST00000449704 DYNC2H1Q8NCM8 4307 aaKnown RBP11.18□□□□□ -0.62
TOP3B-211ENST00000449704 CST9LP1Q5W188 147 aa11.18□□□□□ -0.62
TOP3B-211ENST00000449704 EIF4E3Q8N5X7 224 aaKnown RBP11.18□□□□□ -0.62
TOP3B-211ENST00000449704 CYB561D1Q8N8Q1 229 aa11.18□□□□□ -0.62
TOP3B-211ENST00000449704 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
TOP3B-211ENST00000449704 ATG101Q9BSB4 218 aa11.18□□□□□ -0.62
TOP3B-211ENST00000449704 NDFIP1Q9BT67 221 aa11.18□□□□□ -0.62
TOP3B-211ENST00000449704 NKX6-2Q9C056 277 aaPredicted RBP11.18□□□□□ -0.62
TOP3B-211ENST00000449704 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
TOP3B-211ENST00000449704 IGHV1OR15-1A0A075B7D0 117 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 SNURFLB1AK76 121 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 F6UZH7 168 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 PRNTQ86SH4 94 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 LINC00467Q9BRT7 94 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 GSN-AS1Q9NRJ2 163 aa11.17□□□□□ -0.62
TOP3B-211ENST00000449704 TRAV34A0A0B4J273 112 aa11.16□□□□□ -0.62
TOP3B-211ENST00000449704 PEX7O00628 323 aa11.16□□□□□ -0.62
TOP3B-211ENST00000449704 PAGE4O60829 102 aa11.16□□□□□ -0.62
TOP3B-211ENST00000449704 RAB5CP51148 216 aa11.16□□□□□ -0.62
TOP3B-211ENST00000449704 NKX2-5P52952 324 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-211ENST00000449704 FLI1Q01543 452 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-211ENST00000449704 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
TOP3B-211ENST00000449704 ZNF680Q8NEM1 530 aa11.16□□□□□ -0.62
TOP3B-211ENST00000449704 TP53TG3Q9ULZ0 132 aa11.16□□□□□ -0.62
TOP3B-211ENST00000449704 IGLV2-11P01706 119 aa11.15□□□□□ -0.62
TOP3B-211ENST00000449704 PPT1P50897 306 aa11.15□□□□□ -0.62
TOP3B-211ENST00000449704 Q6AWC8 147 aa11.15□□□□□ -0.62
TOP3B-211ENST00000449704 TMEM75Q8N9X5 138 aa11.15□□□□□ -0.62
TOP3B-211ENST00000449704 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
TOP3B-211ENST00000449704 C8orf49Q96NF6 230 aa11.15□□□□□ -0.62
TOP3B-211ENST00000449704 NAGKQ9UJ70 344 aa11.15□□□□□ -0.62
TOP3B-211ENST00000449704 PLECQ15149 4684 aaKnown RBP11.15□□□□□ -0.63
TOP3B-211ENST00000449704 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 TRAV21A0A0B4J279 112 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 GAGE12BA1L429 117 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 FBLL1A6NHQ2 334 aaKnown RBP11.14□□□□□ -0.63
TOP3B-211ENST00000449704 GAGE7O76087 117 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 LY6G6CO95867 125 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 ATP5G3P48201 142 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 SULT1A2P50226 295 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 FAM159AQ6UWV7 190 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
TOP3B-211ENST00000449704 CCL20P78556 96 aa11.13□□□□□ -0.63
TOP3B-211ENST00000449704 DAZ2Q13117 558 aaKnown RBP11.13□□□□□ -0.63
TOP3B-211ENST00000449704 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
TOP3B-211ENST00000449704 SAPCD1Q5SSQ6 148 aa11.13□□□□□ -0.63
TOP3B-211ENST00000449704 TMEM183AQ8IXX5 376 aa11.13□□□□□ -0.63
TOP3B-211ENST00000449704 APLNQ9ULZ1 77 aa11.13□□□□□ -0.63
TOP3B-211ENST00000449704 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
TOP3B-211ENST00000449704 ARL2-SNX15V9GYD0 113 aa11.13□□□□□ -0.63
TOP3B-211ENST00000449704 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
TOP3B-211ENST00000449704 F5H768 121 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 TEX46H3BTG2 121 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 ATP5G1P05496 136 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 TCTAP57738 103 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 SMUG1Q53HV7 270 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 TCEAL7Q9BRU2 100 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 NDUFAF3Q9BU61 184 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
TOP3B-211ENST00000449704 BIRC6Q9NR09 4857 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 TRGV1A0A0A0MS02 117 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 GCGP01275 180 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 ZNF80P51504 273 aaPredicted RBP11.11□□□□□ -0.63
TOP3B-211ENST00000449704 TCL1AP56279 114 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 UBE2G1P62253 170 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 ZNF415Q09FC8 603 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 IBA57Q5T440 356 aaKnown RBP11.11□□□□□ -0.63
TOP3B-211ENST00000449704 Q6ZTI0 123 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 MDFICQ9P1T7 246 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 BOLA1Q9Y3E2 137 aa11.11□□□□□ -0.63
TOP3B-211ENST00000449704 SACSQ9NZJ4 4579 aa11.1□□□□□ -0.63
TOP3B-211ENST00000449704 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms