RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 C18orf15Q96N68 181 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 UCN2Q96RP3 112 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 K7ERJ3 54 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 LEPROTO15243 131 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 NDUFS5O43920 106 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 IGKV1D-16P01601 117 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 SSR4P51571 173 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 FOXE3Q13461 319 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 DPH3Q96FX2 82 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 HHLA3Q9XRX5 114 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 TCL1BO95988 128 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 FAM120AOSQ5T036 256 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 DGAT2L7PQ6IED9 249 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 CXXC4Q9H2H0 198 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 DKK4Q9UBT3 224 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 USP9YO00507 2555 aaPredicted RBP2.32□□□□□ -2.04
CHD9-203ENST00000447540 RPL27AP46776 148 aaKnown RBP2.32□□□□□ -2.04
CHD9-203ENST00000447540 LY6G5BQ8NDX9 201 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 TMEM167AQ8TBQ9 72 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 RBAKDNA6NC62 111 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 COX8CQ7Z4L0 72 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 ZNF503Q96F45 646 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 DPH3P1Q9H4G8 78 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 SRCAPQ6ZRS2 3230 aa2.32□□□□□ -2.04
CHD9-203ENST00000447540 MBD3L4A6NDZ8 208 aaPredicted RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 MBD3L3A6NE82 208 aaPredicted RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 MBD3L5A6NJ08 208 aaPredicted RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 MED14OSP0DP75 135 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 ABCA2Q9BZC7 2435 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 NTN3O00634 580 aaPredicted RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 DEFA4P12838 97 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 MRPS21P82921 87 aaKnown RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 FANCD2OSQ96PS1 177 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 DAZ1Q9NQZ3 744 aaKnown RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 PHLDA3Q9Y5J5 127 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 SETD2Q9BYW2 2564 aaPredicted RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 TRAV40A0A0B4J280 105 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 TRBV7-6A0A0J9YX20 115 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 A0A1W2PRU2 124 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 F6UB75 175 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 LST1O00453 97 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 IGLV2-8P01709 118 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 MRPL51Q4U2R6 128 aaKnown RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 ARTNQ5T4W7 220 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 MRPL53Q96EL3 112 aaKnown RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 CYYR1Q96J86 154 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 USP9XQ93008 2570 aaPredicted RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 C11orf86A6NJI1 115 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 C12orf77C9JDV5 145 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 K7ENP7 123 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 PRRG2O14669 202 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 CCL16O15467 120 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 ARMS2P0C7Q2 107 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 DAZ2Q13117 558 aaKnown RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 PRRC2CQ9Y520 2896 aaKnown RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 LRRK2Q5S007 2527 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 LINC01546A6NGU7 62 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 K7EQS6 105 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 C2orf66Q6UXQ4 117 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 FAM216BQ8N7L0 139 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 LINC01587Q99440 93 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 IGKV1-12A0A0C4DH73 117 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 COX7A2LO14548 114 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 NDUFA3O95167 84 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 IGKV1D-12P01611 117 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 WT1P19544 449 aaPredicted RBP2.31□□□□□ -2.04
CHD9-203ENST00000447540 HRCT1Q6UXD1 115 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 DEPPQ9NTK1 212 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 PKIGQ9Y2B9 76 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 A8MZ25 164 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 USP17L23D6RBM5 183 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 TTC28Q96AY4 2481 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 ZNF561-AS1K7EIQ3 104 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 PRSS12P56730 875 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 UBE2BP63146 152 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 FAM167A-AS1Q96KT0 104 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 DKK2Q9UBU2 259 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 IGKV3D-11A0A0A0MRZ8 115 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 LINC00473A8K010 186 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 SPRY4Q9C004 299 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 PYGO1Q9Y3Y4 419 aa2.31□□□□□ -2.04
CHD9-203ENST00000447540 NBR2O15453 112 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 SH2D1AO60880 128 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 DAD1P61803 113 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 C11orf53Q8IXP5 236 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 COL5A1P20908 1838 aaPredicted RBP2.3□□□□□ -2.04
CHD9-203ENST00000447540 IGHV1-45A0A0A0MS14 117 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 A0A0U1RRA0 63 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 A0A1W2PP55 124 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 SDIM1Q6ZPB5 146 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 WFDC5Q8TCV5 224 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 C6orf106Q9H6K1 298 aaPredicted RBP2.3□□□□□ -2.04
CHD9-203ENST00000447540 A0A0J9YY99 117 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 RPL35AP18077 110 aaKnown RBP2.3□□□□□ -2.04
CHD9-203ENST00000447540 GATA3P23771 443 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 FXYD5Q96DB9 178 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 ICOSQ9Y6W8 199 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
CHD9-203ENST00000447540 A0A0G2JRQ6 117 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms