RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 SGK494Q96LW2 274 aa13.09□□□□□ -0.31
PHTF1-207ENST00000446739 TREM1Q9NP99 234 aa13.09□□□□□ -0.31
PHTF1-207ENST00000446739 GNG13Q9P2W3 67 aa13.09□□□□□ -0.31
PHTF1-207ENST00000446739 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 HTN1P15515 57 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 EMP1P54849 157 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 ZNF493Q6ZR52 646 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 TMEM263Q8WUH6 116 aaKnown RBP13.08□□□□□ -0.32
PHTF1-207ENST00000446739 TVP23CQ96ET8 276 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.32
PHTF1-207ENST00000446739 C11orf94C9JXX5 98 aa13.07□□□□□ -0.32
PHTF1-207ENST00000446739 IFNA1P01562 189 aa13.07□□□□□ -0.32
PHTF1-207ENST00000446739 PRM2P04554 102 aa13.07□□□□□ -0.32
PHTF1-207ENST00000446739 AZU1P20160 251 aa13.07□□□□□ -0.32
PHTF1-207ENST00000446739 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
PHTF1-207ENST00000446739 Q6AWC8 147 aa13.07□□□□□ -0.32
PHTF1-207ENST00000446739 PRNTQ86SH4 94 aa13.07□□□□□ -0.32
PHTF1-207ENST00000446739 CSMD3Q7Z407 3707 aa13.06□□□□□ -0.32
PHTF1-207ENST00000446739 SPART-AS1P0CW21 52 aa13.06□□□□□ -0.32
PHTF1-207ENST00000446739 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
PHTF1-207ENST00000446739 SAPCD1Q5SSQ6 148 aa13.06□□□□□ -0.32
PHTF1-207ENST00000446739 RNASE8Q8TDE3 154 aaKnown RBP13.06□□□□□ -0.32
PHTF1-207ENST00000446739 LINC00479Q96M42 142 aa13.06□□□□□ -0.32
PHTF1-207ENST00000446739 TXNDC17Q9BRA2 123 aa13.06□□□□□ -0.32
PHTF1-207ENST00000446739 CELA1Q9UNI1 258 aa13.06□□□□□ -0.32
PHTF1-207ENST00000446739 STARD9Q9P2P6 4700 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 TRAV34A0A0B4J273 112 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 RGS13O14921 159 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 AKR1C3P42330 323 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 UBE2G1P62253 170 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 CASC10Q5T4H9 136 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 FAM222AQ5U5X8 452 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 ZFAND6Q6FIF0 208 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 EIF4E3Q8N5X7 224 aaKnown RBP13.05□□□□□ -0.32
PHTF1-207ENST00000446739 FMC1Q96HJ9 113 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 DKK2Q9UBU2 259 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 KLF12Q9Y4X4 402 aa13.05□□□□□ -0.32
PHTF1-207ENST00000446739 IGHV1OR15-1A0A075B7D0 117 aa13.04□□□□□ -0.32
PHTF1-207ENST00000446739 TRAV21A0A0B4J279 112 aa13.04□□□□□ -0.32
PHTF1-207ENST00000446739 PLAC8L1A1L4L8 177 aa13.04□□□□□ -0.32
PHTF1-207ENST00000446739 ANXA2RQ3ZCQ2 193 aa13.04□□□□□ -0.32
PHTF1-207ENST00000446739 SMUG1Q53HV7 270 aa13.04□□□□□ -0.32
PHTF1-207ENST00000446739 Q86TA4 180 aa13.04□□□□□ -0.32
PHTF1-207ENST00000446739 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
PHTF1-207ENST00000446739 TENM2Q9NT68 2774 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 TRBV6-1A0A0K0K1D8 114 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 SCO2A0A1W2PP80 73 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 CBY3A6NI87 242 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
PHTF1-207ENST00000446739 BCL2P10415 239 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 TAGLN2P37802 199 aaKnown RBP13.03□□□□□ -0.32
PHTF1-207ENST00000446739 TMEM183BQ1AE95 376 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 Q6ZQT7 251 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 LYPD6BQ8NI32 183 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 C2CD4CQ8TF44 421 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 ZFP30Q9Y2G7 519 aa13.03□□□□□ -0.32
PHTF1-207ENST00000446739 TIMM8BQ9Y5J9 83 aaPredicted RBP13.03□□□□□ -0.32
PHTF1-207ENST00000446739 NUPR2A6NF83 97 aa13.02□□□□□ -0.33
PHTF1-207ENST00000446739 MEF2BQ02080 365 aaPredicted RBP13.02□□□□□ -0.33
PHTF1-207ENST00000446739 C12orf74Q32Q52 190 aa13.02□□□□□ -0.33
PHTF1-207ENST00000446739 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
PHTF1-207ENST00000446739 SNURFLB1AK76 121 aa13.01□□□□□ -0.33
PHTF1-207ENST00000446739 GCGP01275 180 aa13.01□□□□□ -0.33
PHTF1-207ENST00000446739 TEX261Q6UWH6 196 aa13.01□□□□□ -0.33
PHTF1-207ENST00000446739 FAM159AQ6UWV7 190 aa13.01□□□□□ -0.33
PHTF1-207ENST00000446739 C11orf52Q96A22 123 aa13.01□□□□□ -0.33
PHTF1-207ENST00000446739 VAX2Q9UIW0 290 aa13.01□□□□□ -0.33
PHTF1-207ENST00000446739 PDE6DO43924 150 aa13□□□□□ -0.33
PHTF1-207ENST00000446739 MUC21Q5SSG8 566 aa13□□□□□ -0.33
PHTF1-207ENST00000446739 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
PHTF1-207ENST00000446739 CEMP1Q6PRD7 247 aaPredicted RBP13□□□□□ -0.33
PHTF1-207ENST00000446739 Q6ZTC4 211 aa13□□□□□ -0.33
PHTF1-207ENST00000446739 COX8CQ7Z4L0 72 aa13□□□□□ -0.33
PHTF1-207ENST00000446739 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
PHTF1-207ENST00000446739 LTAP01374 205 aa12.99□□□□□ -0.33
PHTF1-207ENST00000446739 PFN1P07737 140 aaKnown RBP12.99□□□□□ -0.33
PHTF1-207ENST00000446739 ZNF80P51504 273 aaPredicted RBP12.99□□□□□ -0.33
PHTF1-207ENST00000446739 DAD1P61803 113 aa12.99□□□□□ -0.33
PHTF1-207ENST00000446739 TDRG1Q3Y452 100 aa12.99□□□□□ -0.33
PHTF1-207ENST00000446739 C11orf72Q8NBR9 251 aa12.99□□□□□ -0.33
PHTF1-207ENST00000446739 NAGKQ9UJ70 344 aa12.99□□□□□ -0.33
PHTF1-207ENST00000446739 TRGV11A0A075B6L2 103 aa12.98□□□□□ -0.33
PHTF1-207ENST00000446739 TRAV10A0A0B4J240 114 aa12.98□□□□□ -0.33
PHTF1-207ENST00000446739 DAZ2Q13117 558 aaKnown RBP12.98□□□□□ -0.33
PHTF1-207ENST00000446739 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
PHTF1-207ENST00000446739 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
PHTF1-207ENST00000446739 TP53TG3Q9ULZ0 132 aa12.98□□□□□ -0.33
PHTF1-207ENST00000446739 KLK5Q9Y337 293 aaPredicted RBP12.98□□□□□ -0.33
PHTF1-207ENST00000446739 DYNC2H1Q8NCM8 4307 aaKnown RBP12.97□□□□□ -0.33
PHTF1-207ENST00000446739 TCL1AP56279 114 aa12.97□□□□□ -0.33
PHTF1-207ENST00000446739 ZNF415Q09FC8 603 aa12.97□□□□□ -0.33
PHTF1-207ENST00000446739 TMEM183AQ8IXX5 376 aa12.97□□□□□ -0.33
PHTF1-207ENST00000446739 SDF2L1Q9HCN8 221 aa12.97□□□□□ -0.33
PHTF1-207ENST00000446739 GSN-AS1Q9NRJ2 163 aa12.97□□□□□ -0.33
PHTF1-207ENST00000446739 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
PHTF1-207ENST00000446739 FABP5P3A8MUU1 101 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms