RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 TMED6Q8WW62 240 aa7.86□□□□□ -1.15
CDCA3-203ENST00000446553 LINC00588Q9Y4M8 146 aa7.86□□□□□ -1.15
CDCA3-203ENST00000446553 TRAV26-1A0A087WT03 109 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 J3KRW8 73 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 OR7C2O60412 319 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 SPINK4O60575 86 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 MED14OSP0DP75 135 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 BTF3P20290 206 aaKnown RBP7.85□□□□□ -1.15
CDCA3-203ENST00000446553 TCL1AP56279 114 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 BTN1A1Q13410 526 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 OR5I1Q13606 314 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 FFAR4Q5NUL3 377 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 FAM122CQ6P4D5 195 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 TMUB2Q71RG4 321 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 SCGB1C1Q8TD33 95 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 PHYHIPLQ96FC7 376 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 VGLL1Q99990 258 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 UPK3BQ9BT76 320 aa7.85□□□□□ -1.15
CDCA3-203ENST00000446553 IGKV2-40A0A087WW87 121 aaPredicted RBP7.84□□□□□ -1.15
CDCA3-203ENST00000446553 KANTRA0A1W2PQU2 76 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 BCL2L11O43521 198 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 IGKV2D-40P01614 121 aaPredicted RBP7.84□□□□□ -1.15
CDCA3-203ENST00000446553 OR10J4P0C629 311 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 HOXA5P20719 270 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 RNASE4P34096 147 aaKnown RBP7.84□□□□□ -1.15
CDCA3-203ENST00000446553 UBE2L3P68036 154 aaKnown RBP7.84□□□□□ -1.15
CDCA3-203ENST00000446553 ZNF266Q14584 549 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 PQLC2Q6ZP29 291 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 Q6ZTI0 123 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 SSX7Q7RTT5 188 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 ARPC5LQ9BPX5 153 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 Q9H3A6 140 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 GSN-AS1Q9NRJ2 163 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 TP53TG3Q9ULZ0 132 aa7.84□□□□□ -1.15
CDCA3-203ENST00000446553 TRGV2A0A075B6R0 118 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 BORCS7-ASMTA0A0B4J1R7 106 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 A0A1W2PPQ1 181 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 RGS13O14921 159 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 RANP62826 216 aaKnown RBP7.83□□□□□ -1.16
CDCA3-203ENST00000446553 EIF5AP63241 154 aaKnown RBP7.83□□□□□ -1.16
CDCA3-203ENST00000446553 SLAQ13239 276 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 ACOT6Q3I5F7 207 aaPredicted RBP7.83□□□□□ -1.16
CDCA3-203ENST00000446553 TTC32Q5I0X7 151 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 C6orf223Q8N319 242 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 TMPRSS5Q9H3S3 457 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 KLF12Q9Y4X4 402 aa7.83□□□□□ -1.16
CDCA3-203ENST00000446553 TRGV1A0A0A0MS02 117 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 DIRC3C9JPN6 131 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 FAM74A1Q5RGS3 127 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 PRR9Q5T870 116 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 Q6AWC8 147 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 SLC51BQ86UW2 128 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 Q9H8V8 135 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 OTORQ9NRC9 128 aa7.82□□□□□ -1.16
CDCA3-203ENST00000446553 MRPS16Q9Y3D3 137 aaKnown RBP7.82□□□□□ -1.16
CDCA3-203ENST00000446553 A0A0J9YY99 117 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 ZNF415Q09FC8 603 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 TDRG1Q3Y452 100 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 OR2G3Q8NGZ4 309 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 STOML3Q8TAV4 291 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 VSIG2Q96IQ7 327 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 SMIM3Q9BZL3 60 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 WFDC1Q9HC57 220 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 BOLA1Q9Y3E2 137 aa7.81□□□□□ -1.16
CDCA3-203ENST00000446553 LRP1BQ9NZR2 4599 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 A0A096LPF7 62 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 SERTM2A0A1B0GWG4 89 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 A0A1W2PPV4 95 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 TPT1P13693 172 aaKnown RBP7.8□□□□□ -1.16
CDCA3-203ENST00000446553 ESRGQ1W209 222 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 EIF5AL1Q6IS14 154 aaKnown RBP7.8□□□□□ -1.16
CDCA3-203ENST00000446553 IQCF2Q8IXL9 164 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 Q8TAT8 98 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 CMTM2Q8TAZ6 248 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 SPXQ9BT56 116 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 PSMG3Q9BT73 122 aaPredicted RBP7.8□□□□□ -1.16
CDCA3-203ENST00000446553 ZNF471Q9BX82 626 aaPredicted RBP7.8□□□□□ -1.16
CDCA3-203ENST00000446553 CYTL1Q9NRR1 136 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
CDCA3-203ENST00000446553 TRGV11A0A075B6L2 103 aa7.79□□□□□ -1.16
CDCA3-203ENST00000446553 PGPA6NDG6 321 aa7.79□□□□□ -1.16
CDCA3-203ENST00000446553 SERF2P84101 59 aa7.79□□□□□ -1.16
CDCA3-203ENST00000446553 RPL7L1Q6DKI1 246 aaKnown RBP7.79□□□□□ -1.16
CDCA3-203ENST00000446553 SUN5Q8TC36 379 aa7.79□□□□□ -1.16
CDCA3-203ENST00000446553 RASL10AQ92737 203 aa7.79□□□□□ -1.16
CDCA3-203ENST00000446553 PAX4O43316 350 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 MBP02144 154 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 STAG3L2P0CL84 134 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 STAG3L3P0CL85 134 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 TNP2Q05952 138 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 FAM159AQ6UWV7 190 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 Q6ZQT7 251 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 OR10G4Q8NGN3 311 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 OR10G9Q8NGN4 311 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 OR10G7Q8NGN6 311 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 ICOSQ9Y6W8 199 aa7.78□□□□□ -1.16
CDCA3-203ENST00000446553 TRAV21A0A0B4J279 112 aa7.77□□□□□ -1.17
CDCA3-203ENST00000446553 IFNA7P01567 189 aa7.77□□□□□ -1.17
CDCA3-203ENST00000446553 CDC34P49427 236 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms