RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 FAM19A4Q96LR4 140 aa7.4□□□□□ -1.22
HLA-DQB1-206ENST00000443574 NKX6-2Q9C056 277 aaPredicted RBP7.4□□□□□ -1.22
HLA-DQB1-206ENST00000443574 CBY3A6NI87 242 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 C1QBP02746 253 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PPT1P50897 306 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 KIR3DS1Q14943 382 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 DPPA3Q6W0C5 159 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TMUB2Q71RG4 321 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 EIF4E3Q8N5X7 224 aaKnown RBP7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 CYB561D1Q8N8Q1 229 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SUN5Q8TC36 379 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 LINC00476Q8WZB0 136 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FAM210BQ96KR6 192 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 LINC00467Q9BRT7 94 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 NDUFAF3Q9BU61 184 aa7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PLECQ15149 4684 aaKnown RBP7.39□□□□□ -1.23
HLA-DQB1-206ENST00000443574 hCG_2014768A0A024R1R8 64 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 IGHV4-4A0A075B6R2 117 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 LY6G6CO95867 125 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 IFNA7P01567 189 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TCRAP04437 139 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 DEFB130BP0DP73 79 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 DEFB130AP0DP74 79 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 HTN3P15516 51 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 CD300CQ08708 224 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SSX7Q7RTT5 188 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ZFAND2AQ8N6M9 145 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FAM213BQ8TBF2 198 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ATG101Q9BSB4 218 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ARL2-SNX15V9GYD0 113 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SACSQ9NZJ4 4579 aa7.38□□□□□ -1.23
HLA-DQB1-206ENST00000443574 IGHV1OR15-1A0A075B7D0 117 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 GGTLC3B5MD39 225 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 F6UZH7 168 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TEX46H3BTG2 121 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ATP5G1P05496 136 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 AZU1P20160 251 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ATP5G3P48201 142 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FGF8P55075 233 aaPredicted RBP7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SUMO1P63165 101 aaKnown RBP7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 GNG5P63218 68 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ZNF415Q09FC8 603 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ZNF726P1Q15940 193 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ANXA2RQ3ZCQ2 193 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 IBA57Q5T440 356 aaKnown RBP7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 LGALS9CQ6DKI2 356 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TMEM75Q8N9X5 138 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TREM1Q9NP99 234 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 NOP10Q9NPE3 64 aaKnown RBP7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TRGV11A0A075B6L2 103 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TRAV21A0A0B4J279 112 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PLAC8L1A1L4L8 177 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 ZNF324O75467 553 aaPredicted RBP7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 RAB5CP51148 216 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 UBE2G2P60604 165 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FLI1Q01543 452 aaPredicted RBP7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PRR9Q5T870 116 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 Q6AWC8 147 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 HIST1H2BAQ96A08 127 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 EPDR1Q9UM22 224 aa7.36□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TRAV8-1A0A0A6YYK1 113 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 GHRHP01286 108 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PRM2P04554 102 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 H2AFB1P0C5Y9 115 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TCL1AP56279 114 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 UBE2G1P62253 170 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 DAZ2Q13117 558 aaKnown RBP7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 LGALSLQ3ZCW2 172 aaPredicted RBP7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SAPCD1Q5SSQ6 148 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SLC51BQ86UW2 128 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 C15orf53Q8NAA6 179 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SFT2D1Q8WV19 159 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 KCNS1Q96KK3 526 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TMPRSS5Q9H3S3 457 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 NAGKQ9UJ70 344 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 APLNQ9ULZ1 77 aa7.35□□□□□ -1.23
HLA-DQB1-206ENST00000443574 RYR3Q15413 4870 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 F5H768 121 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PEX7O00628 323 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 P0DMU3 169 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FAM231AP0DMU4 169 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FAM231CP0DMU5 169 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 FHITP49789 147 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 SMUG1Q53HV7 270 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 MUC21Q5SSG8 566 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 CST9LP1Q5W188 147 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PRNTQ86SH4 94 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 GSN-AS1Q9NRJ2 163 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 PSG8Q9UQ74 426 aa7.34□□□□□ -1.23
HLA-DQB1-206ENST00000443574 TRGV2A0A075B6R0 118 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 TRGV1A0A0A0MS02 117 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 GAGE12BA1L429 117 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 GAGE7O76087 117 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 GCGP01275 180 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 GAGE12FP0CL80 117 aa7.33□□□□□ -1.24
HLA-DQB1-206ENST00000443574 GAGE12GP0CL81 117 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms